RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 NECTIN4Q96NY8 510 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 ZDHHC7Q9NXF8 308 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 TRAF3IP3Q9Y228 551 aa13.76□□□□□ -0.21
CD9-212ENST00000610354 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 KPNA7A9QM74 516 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 CYB561D2O14569 222 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 CCL16O15467 120 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 EXOC3O60645 756 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 CST3P01034 146 aaPredicted RBP13.75□□□□□ -0.21
CD9-212ENST00000610354 NR3C1P04150 777 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 NTHL1P78549 312 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 YWHAHQ04917 246 aaPredicted RBP13.75□□□□□ -0.21
CD9-212ENST00000610354 SURF1Q15526 300 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 ZCWPW2Q504Y3 356 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 WSCD1Q658N2 575 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 OVOS1Q6IE37 1185 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 WDR49Q8IV35 697 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 OR10T2Q8NGX3 314 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 GOLGA5Q8TBA6 731 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 SLC7A14Q8TBB6 771 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 CCDC127Q96BQ5 260 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 CGRRF1Q99675 332 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 CRISPLD1Q9H336 500 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 DPP7Q9UHL4 492 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 ITGA11Q9UKX5 1188 aa13.75□□□□□ -0.21
CD9-212ENST00000610354 ARHGEF37A1IGU5 675 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 PI4K2BG5E9Z4 385 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 TMEM191BP0C7N4 346 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 DLATP10515 647 aaKnown RBP13.74□□□□□ -0.21
CD9-212ENST00000610354 ODC1P11926 461 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 ATF2P15336 505 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 PAX3P23760 479 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 PRCPP42785 496 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 DLG4P78352 724 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 BFSP1Q12934 665 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 DUOXA2Q1HG44 320 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 UVSSAQ2YD98 709 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 SV2CQ496J9 727 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 PPM1LQ5SGD2 360 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 C1orf220Q5T0J3 134 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 CYP26C1Q6V0L0 522 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 TRAPPC11Q7Z392 1133 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 LIMS2Q7Z4I7 341 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 OSTM1Q86WC4 334 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 ELOA2Q8IYF1 753 aaPredicted RBP13.74□□□□□ -0.21
CD9-212ENST00000610354 TCEAL8Q8IYN2 117 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 LRRC52Q8N7C0 313 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 PARD3BQ8TEW8 1205 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 CCDC47Q96A33 483 aaKnown RBP13.74□□□□□ -0.21
CD9-212ENST00000610354 ANKRD36BP1Q96IX9 119 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 WDR6Q9NNW5 1121 aaKnown RBP13.74□□□□□ -0.21
CD9-212ENST00000610354 MUTYHQ9UIF7 546 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 L1RE1Q9UN81 338 aa13.74□□□□□ -0.21
CD9-212ENST00000610354 CLUHO75153 1309 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 OR6C75A6NL08 312 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 LRRIQ3A6PVS8 624 aaPredicted RBP13.73□□□□□ -0.21
CD9-212ENST00000610354 TNNC2P02585 160 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 KRT19P08727 400 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 HNRNPA1P09651 372 aaKnown RBP eCLIP13.73□□□□□ -0.21
CD9-212ENST00000610354 HOXA9P31269 272 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 CDR1P51861 262 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 CLDN10P78369 228 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 RBP5P82980 135 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 MYBPC2Q14324 1141 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 NFIL3Q16649 462 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 LIN9Q5TKA1 542 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 ZNF658Q5TYW1 1059 aaPredicted RBP13.73□□□□□ -0.21
CD9-212ENST00000610354 TPGS2Q68CL5 300 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 ELMSAN1Q6PJG2 1045 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 GRASPQ7Z6J2 395 aaPredicted RBP13.73□□□□□ -0.21
CD9-212ENST00000610354 USP37Q86T82 979 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 LRRTM3Q86VH5 581 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 ZNF560Q96MR9 790 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 GSDMAQ96QA5 445 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 MYADMQ96S97 322 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 C11orf16Q9NQ32 467 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 HCFC1R1Q9NWW0 138 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 GDAP2Q9NXN4 497 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 AFF4Q9UHB7 1163 aaKnown RBP13.73□□□□□ -0.21
CD9-212ENST00000610354 MAN1B1Q9UKM7 699 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 TECTAO75443 2155 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 TRIOO75962 3097 aa13.73□□□□□ -0.21
CD9-212ENST00000610354 NRG2O14511 850 aaPredicted RBP13.72□□□□□ -0.21
CD9-212ENST00000610354 HCRTO43612 131 aa13.72□□□□□ -0.21
CD9-212ENST00000610354 CALUO43852 315 aaPredicted RBP13.72□□□□□ -0.21
CD9-212ENST00000610354 PRPF40AO75400 957 aaKnown RBP13.72□□□□□ -0.21
CD9-212ENST00000610354 AKAP3O75969 853 aa13.72□□□□□ -0.21
CD9-212ENST00000610354 POU2F2P09086 479 aa13.72□□□□□ -0.21
CD9-212ENST00000610354 CPB1P15086 417 aa13.72□□□□□ -0.21
CD9-212ENST00000610354 TNNI1P19237 187 aa13.72□□□□□ -0.21
CD9-212ENST00000610354 BMP6P22004 513 aa13.72□□□□□ -0.21
CD9-212ENST00000610354 PNPLA4P41247 253 aa13.72□□□□□ -0.21
CD9-212ENST00000610354 PMS1P54277 932 aaKnown RBP13.72□□□□□ -0.21
CD9-212ENST00000610354 ADCY1Q08828 1119 aa13.72□□□□□ -0.21
CD9-212ENST00000610354 GPR17Q13304 367 aa13.72□□□□□ -0.21
CD9-212ENST00000610354 SOWAHAQ2M3V2 549 aa13.72□□□□□ -0.21
CD9-212ENST00000610354 COBLL1Q53SF7 1204 aa13.72□□□□□ -0.21
CD9-212ENST00000610354 ISM2Q6H9L7 571 aa13.72□□□□□ -0.21
CD9-212ENST00000610354 CLEC17AQ6ZS10 378 aa13.72□□□□□ -0.21
CD9-212ENST00000610354 ZDHHC14Q8IZN3 488 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms