RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 NR2E1Q9Y466 385 aa15.39■□□□□ 0.05
HDDC2-206ENST00000608461 SCN1AP35498 2009 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 TNFRSF10AO00220 468 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 CYB561D2O14569 222 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 SPTLC1O15269 473 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 FAM163BP0C2L3 166 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 DLATP10515 647 aaKnown RBP15.38■□□□□ 0.05
HDDC2-206ENST00000608461 NR2F2P24468 414 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 ELF1P32519 619 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 PRCPP42785 496 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 ROR1Q01973 937 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 LRRC63Q05C16 580 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 SMARCB1Q12824 385 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 ADAM9Q13443 819 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 RSPO2Q6UXX9 243 aaPredicted RBP15.38■□□□□ 0.05
HDDC2-206ENST00000608461 TMC5Q6UXY8 1006 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 INTS8Q75QN2 995 aaKnown RBP15.38■□□□□ 0.05
HDDC2-206ENST00000608461 TRAPPC11Q7Z392 1133 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 TCEAL8Q8IYN2 117 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 GJD3Q8N144 294 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 THEM5Q8N1Q8 247 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 TRIML1Q8N9V2 468 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 CCDC127Q96BQ5 260 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 DHTKD1Q96HY7 919 aaPredicted RBP15.38■□□□□ 0.05
HDDC2-206ENST00000608461 MKNK1Q9BUB5 465 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 HSFX1Q9UBD0 423 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 AFF4Q9UHB7 1163 aaKnown RBP15.38■□□□□ 0.05
HDDC2-206ENST00000608461 MAPK8IP1Q9UQF2 711 aa15.38■□□□□ 0.05
HDDC2-206ENST00000608461 WDR27A2RRH5 827 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 LOC730098B7Z3J9 87 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 PSMA7O14818 248 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 ADAM12O43184 909 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 HUS1O60921 280 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 XYLBO75191 536 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 STAU1O95793 577 aaKnown RBP15.37■□□□□ 0.05
HDDC2-206ENST00000608461 KRT19P08727 400 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 SPATA31D3P0C874 917 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 ATICP31939 592 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 PSMC2P35998 433 aaKnown RBP15.37■□□□□ 0.05
HDDC2-206ENST00000608461 GPR17Q13304 367 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 PPM1LQ5SGD2 360 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 SPATA31D4Q6ZUB0 917 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 ADSSL1Q8N142 457 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 TOP6BLQ8N6T0 577 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 C12orf76Q8N812 135 aaPredicted RBP15.37■□□□□ 0.05
HDDC2-206ENST00000608461 OR5B17Q8NGF7 314 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 TSG101Q99816 390 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 SIX4Q9UIU6 781 aa15.37■□□□□ 0.05
HDDC2-206ENST00000608461 C5orf42Q9H799 3197 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 GOLGA6L22H0YM25 854 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 TULP1O00294 542 aaPredicted RBP15.36■□□□□ 0.05
HDDC2-206ENST00000608461 CETN3O15182 167 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 C8AP07357 584 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 LHX1P48742 406 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 FKBP3Q00688 224 aaKnown RBP15.36■□□□□ 0.05
HDDC2-206ENST00000608461 CEP135Q66GS9 1140 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 PLCD3Q8N3E9 789 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 TMEM130Q8N3G9 435 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 C2orf15Q8WU43 125 aaKnown RBP15.36■□□□□ 0.05
HDDC2-206ENST00000608461 SMG7Q92540 1137 aaKnown RBP15.36■□□□□ 0.05
HDDC2-206ENST00000608461 HPDLQ96IR7 371 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 APOL5Q9BWW9 433 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 GZF1Q9H116 711 aaPredicted RBP15.36■□□□□ 0.05
HDDC2-206ENST00000608461 VRTNQ9H8Y1 702 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 WDR6Q9NNW5 1121 aaKnown RBP15.36■□□□□ 0.05
HDDC2-206ENST00000608461 TSHZ2Q9NRE2 1034 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 KIAA1468Q9P260 1216 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 MAN1B1Q9UKM7 699 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 TIMM13Q9Y5L4 95 aaPredicted RBP15.36■□□□□ 0.05
HDDC2-206ENST00000608461 BDP1A6H8Y1 2624 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 PTPRJQ12913 1337 aa15.36■□□□□ 0.05
HDDC2-206ENST00000608461 NCOR1O75376 2440 aa15.35■□□□□ 0.05
HDDC2-206ENST00000608461 RFPL2O75678 378 aa15.35■□□□□ 0.05
HDDC2-206ENST00000608461 KRT13P13646 458 aa15.35■□□□□ 0.05
HDDC2-206ENST00000608461 CPB1P15086 417 aa15.35■□□□□ 0.05
HDDC2-206ENST00000608461 SSTR3P32745 418 aaPredicted RBP15.35■□□□□ 0.05
HDDC2-206ENST00000608461 CASP4P49662 377 aa15.35■□□□□ 0.05
HDDC2-206ENST00000608461 TRPC3Q13507 836 aa15.35■□□□□ 0.05
HDDC2-206ENST00000608461 MORC3Q14149 939 aa15.35■□□□□ 0.05
HDDC2-206ENST00000608461 LMBRD2Q68DH5 695 aaPredicted RBP15.35■□□□□ 0.05
HDDC2-206ENST00000608461 LIMS2Q7Z4I7 341 aa15.35■□□□□ 0.05
HDDC2-206ENST00000608461 ZC3H3Q8IXZ2 948 aaKnown RBP15.35■□□□□ 0.05
HDDC2-206ENST00000608461 SMYD4Q8IYR2 804 aaPredicted RBP15.35■□□□□ 0.05
HDDC2-206ENST00000608461 SLC7A14Q8TBB6 771 aa15.35■□□□□ 0.05
HDDC2-206ENST00000608461 ZNF516Q92618 1163 aa15.35■□□□□ 0.05
HDDC2-206ENST00000608461 SYAP1Q96A49 352 aaPredicted RBP15.35■□□□□ 0.05
HDDC2-206ENST00000608461 ZNF707Q96C28 371 aaPredicted RBP15.35■□□□□ 0.05
HDDC2-206ENST00000608461 ACBD6Q9BR61 282 aa15.35■□□□□ 0.05
HDDC2-206ENST00000608461 POMKQ9H5K3 350 aa15.35■□□□□ 0.05
HDDC2-206ENST00000608461 PIDD1Q9HB75 910 aa15.35■□□□□ 0.05
HDDC2-206ENST00000608461 TSC2P49815 1807 aa15.34■□□□□ 0.05
HDDC2-206ENST00000608461 TTC28Q96AY4 2481 aa15.34■□□□□ 0.05
HDDC2-206ENST00000608461 DENND4AQ7Z401 1863 aa15.34■□□□□ 0.05
HDDC2-206ENST00000608461 BICDL2A1A5D9 508 aa15.34■□□□□ 0.05
HDDC2-206ENST00000608461 LRRIQ3A6PVS8 624 aaPredicted RBP15.34■□□□□ 0.05
HDDC2-206ENST00000608461 PRRG1O14668 218 aa15.34■□□□□ 0.05
HDDC2-206ENST00000608461 SLC16A3O15427 465 aaKnown RBP15.34■□□□□ 0.05
HDDC2-206ENST00000608461 STX10O60499 249 aa15.34■□□□□ 0.05
HDDC2-206ENST00000608461 PHACTR2O75167 634 aa15.34■□□□□ 0.05
HDDC2-206ENST00000608461 AKAP3O75969 853 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms