RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 DCLRE1AQ6PJP8 1040 aa17.65■□□□□ 0.42
PMF1-206ENST00000606952 ZNF571Q7Z3V5 609 aaPredicted RBP17.65■□□□□ 0.42
PMF1-206ENST00000606952 ZSCAN30Q86W11 494 aa17.65■□□□□ 0.42
PMF1-206ENST00000606952 ZNF677Q86XU0 584 aa17.65■□□□□ 0.42
PMF1-206ENST00000606952 ABI1Q8IZP0 508 aa17.65■□□□□ 0.42
PMF1-206ENST00000606952 LRRC43Q8N309 656 aa17.65■□□□□ 0.42
PMF1-206ENST00000606952 RBBP8NLQ8NC74 664 aaPredicted RBP17.65■□□□□ 0.42
PMF1-206ENST00000606952 C3orf58Q8NDZ4 430 aa17.65■□□□□ 0.42
PMF1-206ENST00000606952 BADQ92934 168 aa17.65■□□□□ 0.42
PMF1-206ENST00000606952 EIF3CQ99613 913 aaKnown RBP17.65■□□□□ 0.42
PMF1-206ENST00000606952 HAUS4Q9H6D7 363 aa17.65■□□□□ 0.42
PMF1-206ENST00000606952 NXF1Q9UBU9 619 aaKnown RBP17.65■□□□□ 0.42
PMF1-206ENST00000606952 PYCARDQ9ULZ3 195 aa17.65■□□□□ 0.42
PMF1-206ENST00000606952 CASTOR2A6NHX0 329 aa17.64■□□□□ 0.41
PMF1-206ENST00000606952 NDUFA10O95299 355 aa17.64■□□□□ 0.41
PMF1-206ENST00000606952 PLEKP08567 350 aaPredicted RBP17.64■□□□□ 0.41
PMF1-206ENST00000606952 PAEPP09466 180 aa17.64■□□□□ 0.41
PMF1-206ENST00000606952 CYLC1P35663 651 aaPredicted RBP17.64■□□□□ 0.41
PMF1-206ENST00000606952 EIF4A3P38919 411 aaKnown RBP17.64■□□□□ 0.41
PMF1-206ENST00000606952 BMS1Q14692 1282 aaKnown RBP17.64■□□□□ 0.41
PMF1-206ENST00000606952 SOWAHAQ2M3V2 549 aa17.64■□□□□ 0.41
PMF1-206ENST00000606952 TDRD12Q587J7 1177 aaKnown RBP17.64■□□□□ 0.41
PMF1-206ENST00000606952 UNC93AQ86WB7 457 aa17.64■□□□□ 0.41
PMF1-206ENST00000606952 ZNF280BQ86YH2 543 aa17.64■□□□□ 0.41
PMF1-206ENST00000606952 SLC30A5Q8TAD4 765 aa17.64■□□□□ 0.41
PMF1-206ENST00000606952 KIAA1524Q8TCG1 905 aa17.64■□□□□ 0.41
PMF1-206ENST00000606952 WHAMMQ8TF30 809 aa17.64■□□□□ 0.41
PMF1-206ENST00000606952 DDX1Q92499 740 aaKnown RBP17.64■□□□□ 0.41
PMF1-206ENST00000606952 NRDE2Q9H7Z3 1164 aa17.64■□□□□ 0.41
PMF1-206ENST00000606952 BARX2Q9UMQ3 279 aaPredicted RBP17.64■□□□□ 0.41
PMF1-206ENST00000606952 PCDHB4Q9Y5E5 795 aa17.64■□□□□ 0.41
PMF1-206ENST00000606952 SNX9Q9Y5X1 595 aa17.64■□□□□ 0.41
PMF1-206ENST00000606952 EPN1Q9Y6I3 576 aaPredicted RBP17.64■□□□□ 0.41
PMF1-206ENST00000606952 CARNS1A5YM72 827 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 M0QZQ0 153 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 CYP26A1O43174 497 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 CYP11A1P05108 521 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 WEE2P0C1S8 567 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 CYP11B1P15538 503 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 WARSP23381 471 aaKnown RBP17.63■□□□□ 0.41
PMF1-206ENST00000606952 KIF11P52732 1056 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 DEFB103AP81534 67 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 MTF1Q14872 753 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 SLC18A3Q16572 532 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 TMEM240Q5SV17 173 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 TMEM270Q6UE05 265 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 SCARA5Q6ZMJ2 495 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 CMTR2Q8IYT2 770 aaKnown RBP17.63■□□□□ 0.41
PMF1-206ENST00000606952 KBTBD7Q8WVZ9 684 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 HERVK_113Q902F9 699 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 CCDC42Q96M95 316 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 PAAF1Q9BRP4 392 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 L1RE1Q9UN81 338 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 KIAA1671Q9BY89 1806 aa17.63■□□□□ 0.41
PMF1-206ENST00000606952 ARHGEF37A1IGU5 675 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 GABRDO14764 452 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 HUS1O60921 280 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 FGBP02675 491 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 ACRP10323 421 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 KRT5P13647 590 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 RAP1GAPP47736 663 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 GATMP50440 423 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 PDE6CP51160 858 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 RAD23BP54727 409 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 CDR2Q01850 454 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 ZNF662Q6ZS27 426 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 ZNF365Q70YC5 407 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 NOP9Q86U38 636 aaKnown RBP17.62■□□□□ 0.41
PMF1-206ENST00000606952 SLC47A2Q86VL8 602 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 VPS36Q86VN1 386 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 TMEM86AQ8N2M4 240 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 SUSD3Q96L08 255 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 AGPAT1Q99943 283 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 ADGRG1Q9Y653 693 aa17.62■□□□□ 0.41
PMF1-206ENST00000606952 VWA8A3KMH1 1905 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 TBKBP1A7MCY6 615 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 DDX3XO00571 662 aaKnown RBP eCLIP17.61■□□□□ 0.41
PMF1-206ENST00000606952 B3GAT3O94766 335 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 KIF4AO95239 1232 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 CHRNB2P17787 502 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 TYMPP19971 482 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 IBSPP21815 317 aaPredicted RBP17.61■□□□□ 0.41
PMF1-206ENST00000606952 EPHB4P54760 987 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 CDH8P55286 799 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 FMO1Q01740 532 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 ARID5AQ03989 594 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 RNASELQ05823 741 aaKnown RBP17.61■□□□□ 0.41
PMF1-206ENST00000606952 TIGD5Q53EQ6 642 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 RASIP1Q5U651 963 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 PDCL2Q8N4E4 241 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 SLC4A11Q8NBS3 891 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 APPL2Q8NEU8 664 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 LNX1Q8TBB1 728 aaPredicted RBP17.61■□□□□ 0.41
PMF1-206ENST00000606952 SENP8Q96LD8 212 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 MMS19Q96T76 1030 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 MRPL45Q9BRJ2 306 aaKnown RBP17.61■□□□□ 0.41
PMF1-206ENST00000606952 ELOVL4Q9GZR5 314 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 CWH43Q9H720 699 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 CACNG4Q9UBN1 327 aa17.61■□□□□ 0.41
PMF1-206ENST00000606952 DNAJB4Q9UDY4 337 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms