RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CLDN23Q96B33 292 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 DNAJC19Q96DA6 116 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 TMEM209Q96SK2 561 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 TRMT61BQ9BVS5 477 aaKnown RBP8.26□□□□□ -1.09
CUX1-219ENST00000606749 LRRC3Q9BY71 257 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 BCO2Q9BYV7 579 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 DNAJC25Q9H1X3 360 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 IKZF4Q9H2S9 585 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 CRISPLD1Q9H336 500 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 TRPV4Q9HBA0 871 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 LTB4R2Q9NPC1 389 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 ASAH2Q9NR71 780 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 HEBP1Q9NRV9 189 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 DPP3Q9NY33 737 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 AGO2Q9UKV8 859 aaKnown RBP8.26□□□□□ -1.09
CUX1-219ENST00000606749 SLC27A5Q9Y2P5 690 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 C2CD2Q9Y426 696 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 R4GN57 208 aa8.26□□□□□ -1.09
CUX1-219ENST00000606749 PTPRZ1P23471 2315 aaPredicted RBP8.25□□□□□ -1.09
CUX1-219ENST00000606749 MTMR11A4FU01 709 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 CYB561D2O14569 222 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 NCAM2O15394 837 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 LMNAP02545 664 aaKnown RBP8.25□□□□□ -1.09
CUX1-219ENST00000606749 CYP11A1P05108 521 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 ODC1P11926 461 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 PSMC3P17980 439 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 TARSP26639 723 aaKnown RBP8.25□□□□□ -1.09
CUX1-219ENST00000606749 VIPR2P41587 438 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 EPHB3P54753 998 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 KCNA1Q09470 495 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 PLD1Q13393 1074 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 TEAD2Q15562 447 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 ARMCX5Q6P1M9 558 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 VITQ6UXI7 678 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 ZNF852Q6ZMS4 543 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 DNAJB7Q7Z6W7 309 aaPredicted RBP8.25□□□□□ -1.09
CUX1-219ENST00000606749 TTC9BQ8N6N2 239 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 SHKBP1Q8TBC3 707 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 ZSCAN18Q8TBC5 510 aaPredicted RBP8.25□□□□□ -1.09
CUX1-219ENST00000606749 KCNG4Q8TDN1 519 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 POMGNT1Q8WZA1 660 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 DNASE1L2Q92874 299 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 IRF7Q92985 503 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 HVCN1Q96D96 273 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 BORCS6Q96GS4 357 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 INTS4Q96HW7 963 aaKnown RBP8.25□□□□□ -1.09
CUX1-219ENST00000606749 PANK2Q9BZ23 570 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 GPR88Q9GZN0 384 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 BRD9Q9H8M2 597 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 MRPL44Q9H9J2 332 aaKnown RBP8.25□□□□□ -1.09
CUX1-219ENST00000606749 ZNF334Q9HCZ1 680 aaPredicted RBP8.25□□□□□ -1.09
CUX1-219ENST00000606749 TRPV5Q9NQA5 729 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 SPATA6Q9NWH7 488 aaPredicted RBP8.25□□□□□ -1.09
CUX1-219ENST00000606749 TBC1D7Q9P0N9 293 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 HSFX1Q9UBD0 423 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 SEL1LQ9UBV2 794 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 DSEQ9UL01 958 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 MRPS17Q9Y2R5 130 aaKnown RBP8.25□□□□□ -1.09
CUX1-219ENST00000606749 YIPF1Q9Y548 306 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 ASB3Q9Y575 518 aa8.25□□□□□ -1.09
CUX1-219ENST00000606749 MORC2Q9Y6X9 1032 aaPredicted RBP8.25□□□□□ -1.09
CUX1-219ENST00000606749 COL4A3Q01955 1670 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 CACNA1IQ9P0X4 2223 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 A0A087X0B3 334 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 A0A1W2PRU2 124 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 HEPACAM2A8MVW5 462 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 MAN2B1O00754 1011 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 LAMTOR5O43504 91 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 SOAT2O75908 522 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 GAP43P17677 238 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 GDI1P31150 447 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 TXLNAP40222 546 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 MAGEA9P43362 315 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 RPS9P46781 194 aaKnown RBP8.24□□□□□ -1.09
CUX1-219ENST00000606749 CDR1P51861 262 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 SLC39A14Q15043 492 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 ZNF528Q3MIS6 628 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 L1TD1Q5T7N2 865 aaKnown RBP8.24□□□□□ -1.09
CUX1-219ENST00000606749 WSCD1Q658N2 575 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 ZC3H14Q6PJT7 736 aaKnown RBP8.24□□□□□ -1.09
CUX1-219ENST00000606749 CCDC73Q6ZRK6 1079 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 GAREM2Q75VX8 874 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 LRRTM3Q86VH5 581 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 METTL23Q86XA0 190 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 TMC8Q8IU68 726 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 GPIHBP1Q8IV16 184 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 MFSD6LQ8IWD5 586 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 ZNF687Q8N1G0 1237 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 ZSWIM2Q8NEG5 633 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 OR10T2Q8NGX3 314 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 DEPDC1BQ8WUY9 529 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 PSMG2Q969U7 264 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 E2F7Q96AV8 911 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 ACCSQ96QU6 501 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 USP28Q96RU2 1077 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 PYM1Q9BRP8 204 aaKnown RBP8.24□□□□□ -1.09
CUX1-219ENST00000606749 ZCWPW1Q9H0M4 648 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 ZSCAN16Q9H4T2 348 aaPredicted RBP8.24□□□□□ -1.09
CUX1-219ENST00000606749 FBXO4Q9UKT5 387 aa8.24□□□□□ -1.09
CUX1-219ENST00000606749 EXOC7Q9UPT5 735 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms