RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 OLIG1Q8TAK6 271 aa19.22■□□□□ 0.67
VRK3-225ENST00000601912 ZNF592Q92610 1267 aa19.22■□□□□ 0.67
VRK3-225ENST00000601912 PPP1R12CQ9BZL4 782 aa19.22■□□□□ 0.67
VRK3-225ENST00000601912 TMEM39AQ9NV64 488 aa19.22■□□□□ 0.67
VRK3-225ENST00000601912 TRIM10Q9UDY6 481 aa19.22■□□□□ 0.67
VRK3-225ENST00000601912 PUF60Q9UHX1 559 aaKnown RBP19.22■□□□□ 0.67
VRK3-225ENST00000601912 KPNA7A9QM74 516 aa19.21■□□□□ 0.67
VRK3-225ENST00000601912 PPEF2O14830 753 aa19.21■□□□□ 0.67
VRK3-225ENST00000601912 THAP12O43422 761 aa19.21■□□□□ 0.67
VRK3-225ENST00000601912 ABL1P00519 1130 aa19.21■□□□□ 0.67
VRK3-225ENST00000601912 RAP1GAPP47736 663 aa19.21■□□□□ 0.67
VRK3-225ENST00000601912 CDH8P55286 799 aa19.21■□□□□ 0.67
VRK3-225ENST00000601912 GPNMBQ14956 572 aa19.21■□□□□ 0.67
VRK3-225ENST00000601912 ZNF394Q53GI3 561 aa19.21■□□□□ 0.67
VRK3-225ENST00000601912 GLB1LQ6UWU2 654 aa19.21■□□□□ 0.67
VRK3-225ENST00000601912 SYT10Q6XYQ8 523 aa19.21■□□□□ 0.67
VRK3-225ENST00000601912 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.21■□□□□ 0.67
VRK3-225ENST00000601912 KIF18AQ8NI77 898 aa19.21■□□□□ 0.67
VRK3-225ENST00000601912 GOLGA2P5Q9HBQ8 144 aa19.21■□□□□ 0.67
VRK3-225ENST00000601912 MIOSQ9NXC5 875 aa19.21■□□□□ 0.67
VRK3-225ENST00000601912 TMCO5BA8MYB1 307 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 CLTBP09497 229 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 RPL9P32969 192 aaKnown RBP19.2■□□□□ 0.66
VRK3-225ENST00000601912 CCL23P55773 120 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 GRIK3Q13003 919 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 TRIM72Q6ZMU5 477 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 LINC01599Q8WXQ3 324 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 SECISBP2LQ93073 1101 aaKnown RBP19.2■□□□□ 0.66
VRK3-225ENST00000601912 SCLYQ96I15 445 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 SDCBP2Q9H190 292 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 DNAI1Q9UI46 699 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 BARX2Q9UMQ3 279 aaPredicted RBP19.2■□□□□ 0.66
VRK3-225ENST00000601912 MACROD2A1Z1Q3 448 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 ENPP3O14638 875 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 RTN2O75298 545 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 CILPO75339 1184 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 PAEPP09466 180 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 ZNF569Q5MCW4 686 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 PALB2Q86YC2 1186 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 PCDHB18PQ96TA0 734 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 PACSIN1Q9BY11 444 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 IRX2Q9BZI1 471 aaPredicted RBP19.2■□□□□ 0.66
VRK3-225ENST00000601912 WNT8AQ9H1J5 351 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 ELAC1Q9H777 363 aaKnown RBP19.2■□□□□ 0.66
VRK3-225ENST00000601912 TMEM161AQ9NX61 479 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 GDAP2Q9NXN4 497 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 TBX21Q9UL17 535 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 INPP5FQ9Y2H2 1132 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 DUSP10Q9Y6W6 482 aa19.2■□□□□ 0.66
VRK3-225ENST00000601912 KIAA0100Q14667 2235 aaKnown RBP19.2■□□□□ 0.66
VRK3-225ENST00000601912 SCN1AP35498 2009 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 INPPL1O15357 1258 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 POMCP01189 267 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 CXCL10P02778 98 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 FTLP02792 175 aaPredicted RBP19.19■□□□□ 0.66
VRK3-225ENST00000601912 CYP2C18P33260 490 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 AFF1P51825 1210 aaKnown RBP19.19■□□□□ 0.66
VRK3-225ENST00000601912 GALCP54803 685 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 NAP1L1P55209 391 aaKnown RBP19.19■□□□□ 0.66
VRK3-225ENST00000601912 LILRA4P59901 499 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 INCA1Q0VD86 236 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 RNF10Q8N5U6 811 aaKnown RBP19.19■□□□□ 0.66
VRK3-225ENST00000601912 URGCPQ8TCY9 931 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 ZNF606Q8WXB4 792 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 CTNNBL1Q8WYA6 563 aaPredicted RBP19.19■□□□□ 0.66
VRK3-225ENST00000601912 DDX27Q96GQ7 796 aaKnown RBP19.19■□□□□ 0.66
VRK3-225ENST00000601912 DNAI2Q9GZS0 605 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 ISCUQ9H1K1 167 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 PRDM10Q9NQV6 1147 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 RNF216Q9NWF9 866 aaPredicted RBP19.19■□□□□ 0.66
VRK3-225ENST00000601912 PCDHB7Q9Y5E2 793 aa19.19■□□□□ 0.66
VRK3-225ENST00000601912 ANKRD62A6NC57 917 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 BTNL10A8MVZ5 291 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 PODXLO00592 558 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 MED7O43513 233 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 CALCAP01258 141 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 CASQ1P31415 396 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 RAD23BP54727 409 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 LRRC26Q2I0M4 334 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 PPP1R2P3Q6NXS1 205 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 APPL2Q8NEU8 664 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 TMEM176AQ96HP8 235 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 NOX5Q96PH1 765 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 TAS2R14Q9NYV8 317 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 KANSL3Q9P2N6 904 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 PAXBP1Q9Y5B6 917 aa19.18■□□□□ 0.66
VRK3-225ENST00000601912 HUS1O60921 280 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 TACC1O75410 805 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 TMEM253P0C7T8 217 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 CD19P15391 556 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 TUSC3Q13454 348 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 IFI16Q16666 785 aaKnown RBP19.17■□□□□ 0.66
VRK3-225ENST00000601912 CLEC16AQ2KHT3 1053 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 ACAD10Q6JQN1 1059 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 DPH6Q7L8W6 267 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 WHAMMQ8TF30 809 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 UROC1Q96N76 676 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 ALS2CR12Q96Q35 445 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 NT5C1AQ9BXI3 368 aa19.17■□□□□ 0.66
VRK3-225ENST00000601912 KIAA1257Q9ULG3 409 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms