RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 GOLGA8IPA6NC78 632 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 GOLGA8JA6NMD2 632 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 ZNF197O14709 1029 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 CYP11A1P05108 521 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 NPR3P17342 541 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 CEBPBP17676 345 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 TFAMQ00059 246 aaKnown RBP28.15■■■□□ 2.1
PNKP-216ENST00000601816 GPR17Q13304 367 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 RESP18Q5W5W9 173 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 PDZD4Q76G19 769 aaPredicted RBP28.15■■■□□ 2.1
PNKP-216ENST00000601816 GLIS3Q8NEA6 775 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 GPR152Q8TDT2 470 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 ZNF512Q96ME7 567 aaPredicted RBP28.15■■■□□ 2.1
PNKP-216ENST00000601816 C7orf25Q9BPX7 421 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 PCIF1Q9H4Z3 704 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 GDE1Q9NZC3 331 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 YIPF1Q9Y548 306 aa28.15■■■□□ 2.1
PNKP-216ENST00000601816 CYB561D2O14569 222 aa28.14■■■□□ 2.1
PNKP-216ENST00000601816 WNT7BP56706 349 aa28.14■■■□□ 2.1
PNKP-216ENST00000601816 SV2CQ496J9 727 aa28.14■■■□□ 2.1
PNKP-216ENST00000601816 PRSS36Q5K4E3 855 aa28.14■■■□□ 2.1
PNKP-216ENST00000601816 CYP4A22Q5TCH4 519 aa28.14■■■□□ 2.1
PNKP-216ENST00000601816 METTL23Q86XA0 190 aa28.14■■■□□ 2.1
PNKP-216ENST00000601816 MCRS1Q96EZ8 462 aa28.14■■■□□ 2.1
PNKP-216ENST00000601816 ZNF560Q96MR9 790 aa28.14■■■□□ 2.1
PNKP-216ENST00000601816 PYM1Q9BRP8 204 aaKnown RBP28.14■■■□□ 2.1
PNKP-216ENST00000601816 CEP72Q9P209 647 aa28.14■■■□□ 2.1
PNKP-216ENST00000601816 KRBA1A5PL33 1030 aa28.13■■■□□ 2.09
PNKP-216ENST00000601816 KIAA0391O15091 583 aaKnown RBP28.13■■■□□ 2.09
PNKP-216ENST00000601816 EIF3DO15371 548 aaKnown RBP eCLIP28.13■■■□□ 2.09
PNKP-216ENST00000601816 GALR2O43603 387 aaPredicted RBP28.13■■■□□ 2.09
PNKP-216ENST00000601816 VNN2O95498 520 aa28.13■■■□□ 2.09
PNKP-216ENST00000601816 AOC1P19801 751 aa28.13■■■□□ 2.09
PNKP-216ENST00000601816 RFX1P22670 979 aa28.13■■■□□ 2.09
PNKP-216ENST00000601816 DUSP4Q13115 394 aa28.13■■■□□ 2.09
PNKP-216ENST00000601816 PLD1Q13393 1074 aa28.13■■■□□ 2.09
PNKP-216ENST00000601816 FAM26FQ5R3K3 315 aa28.13■■■□□ 2.09
PNKP-216ENST00000601816 GPD1LQ8N335 351 aa28.13■■■□□ 2.09
PNKP-216ENST00000601816 CACTINQ8WUQ7 758 aaKnown RBP28.13■■■□□ 2.09
PNKP-216ENST00000601816 KXD1Q9BQD3 176 aa28.13■■■□□ 2.09
PNKP-216ENST00000601816 RCOR1Q9UKL0 485 aa28.13■■■□□ 2.09
PNKP-216ENST00000601816 STK25O00506 426 aa28.12■■■□□ 2.09
PNKP-216ENST00000601816 PNPLA4P41247 253 aa28.12■■■□□ 2.09
PNKP-216ENST00000601816 UNC13DQ70J99 1090 aa28.12■■■□□ 2.09
PNKP-216ENST00000601816 LEMD2Q8NC56 503 aa28.12■■■□□ 2.09
PNKP-216ENST00000601816 TCEAL4Q96EI5 215 aa28.12■■■□□ 2.09
PNKP-216ENST00000601816 TMEM209Q96SK2 561 aa28.12■■■□□ 2.09
PNKP-216ENST00000601816 RTP3Q9BQQ7 232 aa28.12■■■□□ 2.09
PNKP-216ENST00000601816 IRF2BPLQ9H1B7 796 aa28.12■■■□□ 2.09
PNKP-216ENST00000601816 ASAH2Q9NR71 780 aa28.12■■■□□ 2.09
PNKP-216ENST00000601816 ARHGEF3Q9NR81 526 aa28.12■■■□□ 2.09
PNKP-216ENST00000601816 TSC2P49815 1807 aa28.12■■■□□ 2.09
PNKP-216ENST00000601816 MTMR11A4FU01 709 aa28.11■■■□□ 2.09
PNKP-216ENST00000601816 KPNA7A9QM74 516 aa28.11■■■□□ 2.09
PNKP-216ENST00000601816 MICAL2O94851 1124 aa28.11■■■□□ 2.09
PNKP-216ENST00000601816 POLR2BP30876 1174 aaKnown RBP28.11■■■□□ 2.09
PNKP-216ENST00000601816 GPC5P78333 572 aa28.11■■■□□ 2.09
PNKP-216ENST00000601816 CENPPQ6IPU0 288 aa28.11■■■□□ 2.09
PNKP-216ENST00000601816 HS6ST3Q8IZP7 471 aa28.11■■■□□ 2.09
PNKP-216ENST00000601816 THEM5Q8N1Q8 247 aa28.11■■■□□ 2.09
PNKP-216ENST00000601816 OR10T2Q8NGX3 314 aa28.11■■■□□ 2.09
PNKP-216ENST00000601816 BLZF1Q9H2G9 400 aa28.11■■■□□ 2.09
PNKP-216ENST00000601816 CRISPLD1Q9H336 500 aa28.11■■■□□ 2.09
PNKP-216ENST00000601816 SCN1AP35498 2009 aa28.11■■■□□ 2.09
PNKP-216ENST00000601816 ITGB3P05106 788 aa28.1■■■□□ 2.09
PNKP-216ENST00000601816 MYL4P12829 197 aa28.1■■■□□ 2.09
PNKP-216ENST00000601816 HOXD13P35453 343 aa28.1■■■□□ 2.09
PNKP-216ENST00000601816 CCR2P41597 374 aa28.1■■■□□ 2.09
PNKP-216ENST00000601816 ALDH1A3P47895 512 aa28.1■■■□□ 2.09
PNKP-216ENST00000601816 EPHB3P54753 998 aa28.1■■■□□ 2.09
PNKP-216ENST00000601816 WSCD1Q658N2 575 aa28.1■■■□□ 2.09
PNKP-216ENST00000601816 EPM2AIP1Q7L775 607 aaPredicted RBP28.1■■■□□ 2.09
PNKP-216ENST00000601816 ALYREFQ86V81 257 aaKnown RBP28.1■■■□□ 2.09
PNKP-216ENST00000601816 C1orf127Q8N9H9 656 aa28.1■■■□□ 2.09
PNKP-216ENST00000601816 ATAD1Q8NBU5 361 aa28.1■■■□□ 2.09
PNKP-216ENST00000601816 BORCS6Q96GS4 357 aa28.1■■■□□ 2.09
PNKP-216ENST00000601816 TBC1D17Q9HA65 648 aa28.1■■■□□ 2.09
PNKP-216ENST00000601816 PDE11AQ9HCR9 933 aa28.1■■■□□ 2.09
PNKP-216ENST00000601816 AGAP1Q9UPQ3 857 aa28.1■■■□□ 2.09
PNKP-216ENST00000601816 PI15O43692 258 aa28.09■■■□□ 2.09
PNKP-216ENST00000601816 ECI2O75521 394 aa28.09■■■□□ 2.09
PNKP-216ENST00000601816 CASP1P29466 404 aa28.09■■■□□ 2.09
PNKP-216ENST00000601816 EPHA5P54756 1037 aa28.09■■■□□ 2.09
PNKP-216ENST00000601816 CEP57L1Q8IYX8 460 aa28.09■■■□□ 2.09
PNKP-216ENST00000601816 ZNF507Q8TCN5 953 aa28.09■■■□□ 2.09
PNKP-216ENST00000601816 ZCWPW1Q9H0M4 648 aa28.09■■■□□ 2.09
PNKP-216ENST00000601816 ITGA11Q9UKX5 1188 aa28.09■■■□□ 2.09
PNKP-216ENST00000601816 SLC27A5Q9Y2P5 690 aa28.09■■■□□ 2.09
PNKP-216ENST00000601816 UBE4BO95155 1302 aa28.09■■■□□ 2.09
PNKP-216ENST00000601816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.08■■■□□ 2.09
PNKP-216ENST00000601816 ZNF233A6NK53 670 aa28.08■■■□□ 2.09
PNKP-216ENST00000601816 TMEM191BP0C7N4 346 aa28.08■■■□□ 2.09
PNKP-216ENST00000601816 AFMP43652 599 aa28.08■■■□□ 2.09
PNKP-216ENST00000601816 SLC39A12Q504Y0 691 aa28.08■■■□□ 2.09
PNKP-216ENST00000601816 POTEHQ6S545 545 aa28.08■■■□□ 2.09
PNKP-216ENST00000601816 LRRC52Q8N7C0 313 aa28.08■■■□□ 2.09
PNKP-216ENST00000601816 KIAA1586Q9HCI6 787 aa28.08■■■□□ 2.09
PNKP-216ENST00000601816 HSPBP1Q9NZL4 362 aa28.08■■■□□ 2.09
PNKP-216ENST00000601816 HSFX1Q9UBD0 423 aa28.08■■■□□ 2.09
PNKP-216ENST00000601816 MRE11P49959 708 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms