RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 UNGP13051 313 aaPredicted RBP18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 ABCB4P21439 1286 aa18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 RAP1GAPP47736 663 aa18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 TCEAL1Q15170 157 aa18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 PPP1R2P3Q6NXS1 205 aa18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 AGMOQ6ZNB7 445 aa18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 LRRC8DQ7L1W4 858 aa18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 RFFLQ8WZ73 363 aa18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 CALR3Q96L12 384 aaKnown RBP18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 ZNF560Q96MR9 790 aa18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 RPS6KC1Q96S38 1066 aa18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 MMS19Q96T76 1030 aa18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 THAP2Q9H0W7 228 aa18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 PCDHGC5Q9Y5F6 944 aa18.83■□□□□ 0.61
SHKBP1-224ENST00000600718 CILPO75339 1184 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 TFRCP02786 760 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 LRPAP1P30533 357 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 MBTPS1Q14703 1052 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 ZNF394Q53GI3 561 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 FAM43BQ6ZT52 329 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 BARX2Q9UMQ3 279 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 MEIS3P2A8K0S8 358 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 PPEF2O14830 753 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 THP07101 528 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 RAD23BP54727 409 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 INCA1Q0VD86 236 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 PAPD7Q5XG87 772 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 RHOT2Q8IXI1 618 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 LPPQ93052 612 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 ZNF333Q96JL9 665 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 ZFP42Q96MM3 310 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 GAD1Q99259 594 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 RGS18Q9NS28 235 aa18.82■□□□□ 0.6
SHKBP1-224ENST00000600718 ARL5CA6NH57 179 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 PALMO75781 387 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 HSPA8P11142 646 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 MLH1P40692 756 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 SOX4Q06945 474 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 DMTNQ08495 405 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 PKN2Q16513 984 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 ECHDC2Q86YB7 292 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 GSTCDQ8NEC7 633 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 TPCN2Q8NHX9 752 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 SLC35G2Q8TBE7 412 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 WHAMMQ8TF30 809 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 CYFIP2Q96F07 1278 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 TMEM176AQ96HP8 235 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 GDAP2Q9NXN4 497 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 PCDHGC3Q9UN70 934 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 SNX9Q9Y5X1 595 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 MRFAP1Q9Y605 127 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 HTTP42858 3142 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 PITPNM1O00562 1244 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 MED7O43513 233 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 ATP1A1P05023 1023 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 TAF6P49848 677 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 CENPCQ03188 943 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 SV2CQ496J9 727 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 SLC39A5Q6ZMH5 540 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 ARHGEF26Q96DR7 871 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 TRIM11Q96F44 468 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 FTHL17Q9BXU8 183 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 RSAD1Q9HA92 442 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 CDC23Q9UJX2 597 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 KIAA1257Q9ULG3 409 aa18.81■□□□□ 0.6
SHKBP1-224ENST00000600718 KPNA7A9QM74 516 aa18.8■□□□□ 0.6
SHKBP1-224ENST00000600718 ENC1O14682 589 aa18.8■□□□□ 0.6
SHKBP1-224ENST00000600718 LSM8O95777 96 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-224ENST00000600718 BRD2P25440 801 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-224ENST00000600718 NSFP46459 744 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-224ENST00000600718 HADHBP55084 474 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-224ENST00000600718 NAA35Q5VZE5 725 aa18.8■□□□□ 0.6
SHKBP1-224ENST00000600718 ANKRD33Q7Z3H0 272 aa18.8■□□□□ 0.6
SHKBP1-224ENST00000600718 SLC4A11Q8NBS3 891 aa18.8■□□□□ 0.6
SHKBP1-224ENST00000600718 ARMC5Q96C12 935 aa18.8■□□□□ 0.6
SHKBP1-224ENST00000600718 ELOVL4Q9GZR5 314 aa18.8■□□□□ 0.6
SHKBP1-224ENST00000600718 MIOSQ9NXC5 875 aa18.8■□□□□ 0.6
SHKBP1-224ENST00000600718 PDCD11Q14690 1871 aaKnown RBP18.8■□□□□ 0.6
SHKBP1-224ENST00000600718 GRID2IPA4D2P6 1211 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 EOMESO95936 686 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 CYP1A2P05177 515 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 CFHP08603 1231 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 MYBL1P10243 752 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 MNX1P50219 401 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 NOMO3P69849 1222 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 AMPD2Q01433 879 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 SLC24A5Q71RS6 500 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 ZNF598Q86UK7 904 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 RTN4RL1Q86UN2 441 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 MCOLN2Q8IZK6 566 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 RNF169Q8NCN4 708 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 CPA5Q8WXQ8 436 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 TFAP2BQ92481 460 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 ZNF518BQ9C0D4 1074 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 TSPYL2Q9H2G4 693 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 GOLGA2P5Q9HBQ8 144 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 GTF3C4Q9UKN8 822 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 SAR1BQ9Y6B6 198 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 TRIP11Q15643 1979 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 PQBP1O60828 265 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms