RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 LILRA4P59901 499 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 FAM78AQ5JUQ0 283 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 RRAGBQ5VZM2 374 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 C9orf57Q5W0N0 161 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 ZC3H14Q6PJT7 736 aaKnown RBP20.29■□□□□ 0.84
PNKP-213ENST00000599543 POTEHQ6S545 545 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 TPRG1Q6ZUI0 275 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 SFR1Q86XK3 245 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 HS6ST3Q8IZP7 471 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 ASB16Q96NS5 453 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 PLA2G2FQ9BZM2 168 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 ASB7Q9H672 318 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 AGO2Q9UKV8 859 aaKnown RBP20.29■□□□□ 0.84
PNKP-213ENST00000599543 ZNF292O60281 2723 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 FRYLO94915 3013 aa20.29■□□□□ 0.84
PNKP-213ENST00000599543 TISP43B9A030 160 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 SPTLC2O15270 562 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 FCARP24071 287 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 ANP32AP39687 249 aaKnown RBP20.28■□□□□ 0.84
PNKP-213ENST00000599543 EPHB3P54753 998 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 EPHA5P54756 1037 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 DUSP4Q13115 394 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 GPR17Q13304 367 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 MYBPC2Q14324 1141 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 GRM2Q14416 872 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 ARMCX5Q6P1M9 558 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 ZNF720Q7Z2F6 126 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 KCNG4Q8TDN1 519 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 POMGNT1Q8WZA1 660 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 DNASE1L2Q92874 299 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 SMARCD2Q92925 531 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 HVCN1Q96D96 273 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 SENP8Q96LD8 212 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 OSBPL6Q9BZF3 934 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 SLITRK6Q9H5Y7 841 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 BRD9Q9H8M2 597 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 MRPL44Q9H9J2 332 aaKnown RBP20.28■□□□□ 0.84
PNKP-213ENST00000599543 LTB4R2Q9NPC1 389 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 HEBP1Q9NRV9 189 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 SEL1LQ9UBV2 794 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 C2CD2Q9Y426 696 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 STYXL1Q9Y6J8 313 aa20.28■□□□□ 0.84
PNKP-213ENST00000599543 FAM170BA6NMN3 283 aa20.27■□□□□ 0.84
PNKP-213ENST00000599543 PDIA4P13667 645 aaKnown RBP20.27■□□□□ 0.84
PNKP-213ENST00000599543 CD72P21854 359 aa20.27■□□□□ 0.84
PNKP-213ENST00000599543 ALDH1A3P47895 512 aa20.27■□□□□ 0.84
PNKP-213ENST00000599543 SV2BQ7L1I2 683 aa20.27■□□□□ 0.84
PNKP-213ENST00000599543 ADSSL1Q8N142 457 aa20.27■□□□□ 0.84
PNKP-213ENST00000599543 TRMT61BQ9BVS5 477 aaKnown RBP20.27■□□□□ 0.84
PNKP-213ENST00000599543 PANK2Q9BZ23 570 aa20.27■□□□□ 0.84
PNKP-213ENST00000599543 SEMA4AQ9H3S1 761 aa20.27■□□□□ 0.84
PNKP-213ENST00000599543 SPATA6Q9NWH7 488 aaPredicted RBP20.27■□□□□ 0.84
PNKP-213ENST00000599543 MTF2Q9Y483 593 aaPredicted RBP20.27■□□□□ 0.84
PNKP-213ENST00000599543 R4GN57 208 aa20.27■□□□□ 0.84
PNKP-213ENST00000599543 PIRO00625 290 aa20.26■□□□□ 0.83
PNKP-213ENST00000599543 NRG2O14511 850 aaPredicted RBP20.26■□□□□ 0.83
PNKP-213ENST00000599543 SPTLC1O15269 473 aa20.26■□□□□ 0.83
PNKP-213ENST00000599543 VNN2O95498 520 aa20.26■□□□□ 0.83
PNKP-213ENST00000599543 SP9P0CG40 484 aa20.26■□□□□ 0.83
PNKP-213ENST00000599543 GJA1P17302 382 aa20.26■□□□□ 0.83
PNKP-213ENST00000599543 GAP43P17677 238 aa20.26■□□□□ 0.83
PNKP-213ENST00000599543 MAGEA9P43362 315 aa20.26■□□□□ 0.83
PNKP-213ENST00000599543 POSTNQ15063 836 aa20.26■□□□□ 0.83
PNKP-213ENST00000599543 ZNF852Q6ZMS4 543 aa20.26■□□□□ 0.83
PNKP-213ENST00000599543 ZSCAN18Q8TBC5 510 aaPredicted RBP20.26■□□□□ 0.83
PNKP-213ENST00000599543 ZSWIM3Q96MP5 696 aa20.26■□□□□ 0.83
PNKP-213ENST00000599543 CRISPLD1Q9H336 500 aa20.26■□□□□ 0.83
PNKP-213ENST00000599543 DSEQ9UL01 958 aa20.26■□□□□ 0.83
PNKP-213ENST00000599543 EXOC7Q9UPT5 735 aa20.26■□□□□ 0.83
PNKP-213ENST00000599543 MRPS17Q9Y2R5 130 aaKnown RBP20.26■□□□□ 0.83
PNKP-213ENST00000599543 COL4A2P08572 1712 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 NUP210Q8TEM1 1887 aaPredicted RBP20.25■□□□□ 0.83
PNKP-213ENST00000599543 ANO9A1A5B4 782 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 MTMR11A4FU01 709 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 MYMKA6NI61 221 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 NCAM2O15394 837 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 MOSPD3O75425 235 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 PPP1R37O75864 691 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 YEATS4O95619 227 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 LMNAP02545 664 aaKnown RBP20.25■□□□□ 0.83
PNKP-213ENST00000599543 PSMC3P17980 439 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 STAT6P42226 847 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 POU5F1Q01860 360 aaKnown RBP20.25■□□□□ 0.83
PNKP-213ENST00000599543 TEAD2Q15562 447 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 CENPPQ6IPU0 288 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 CCDC73Q6ZRK6 1079 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 IRF7Q92985 503 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 NELL2Q99435 816 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 GPR88Q9GZN0 384 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 IKZF4Q9H2S9 585 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 DPP3Q9NY33 737 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 TBC1D7Q9P0N9 293 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 SLC27A5Q9Y2P5 690 aa20.25■□□□□ 0.83
PNKP-213ENST00000599543 DCHS1Q96JQ0 3298 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 A0A1W2PRU2 124 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 LAMTOR5O43504 91 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 IL18RAPO95256 599 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 GCNT3O95395 438 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 CYP11A1P05108 521 aa20.24■□□□□ 0.83
PNKP-213ENST00000599543 TARSP26639 723 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms