RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 LMBRD2Q68DH5 695 aaPredicted RBP24.39■■□□□ 1.49
CCDC9-204ENST00000599398 METTL23Q86XA0 190 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 C1orf127Q8N9H9 656 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 MFSD14AQ96MC6 490 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 PGLYRP2Q96PD5 576 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 KIAA1586Q9HCI6 787 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 IGSF9Q9P2J2 1179 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 DSEQ9UL01 958 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 AGAP1Q9UPQ3 857 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 TSC2P49815 1807 aa24.39■■□□□ 1.49
CCDC9-204ENST00000599398 A0A1W2PQ27 194 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 A0A1W2PQ64 194 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 A0A1W2PQD8 194 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 KPNA7A9QM74 516 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 KRT19P08727 400 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 LAMP2P13473 410 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 PNPLA4P41247 253 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 TDGQ13569 410 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 KMT5BQ4FZB7 885 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 CSGALNACT2Q8N6G5 542 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 RDH13Q8NBN7 331 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 RSAD2Q8WXG1 361 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 ASIC4Q96FT7 647 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 ANKRD36BP1Q96IX9 119 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 MTMR12Q9C0I1 747 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 MAFFQ9ULX9 164 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 NOTCH4Q99466 2003 aa24.38■■□□□ 1.49
CCDC9-204ENST00000599398 ZDBF2Q9HCK1 2354 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 FAM237AA0A1B0GTK4 181 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 CYP11A1P05108 521 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 MYL1P05976 194 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 PTPN2P17706 415 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 SNRPFP62306 86 aaKnown RBP24.37■■□□□ 1.49
CCDC9-204ENST00000599398 MYBPC2Q14324 1141 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 SURF1Q15526 300 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 KNOP1Q1ED39 458 aaKnown RBP24.37■■□□□ 1.49
CCDC9-204ENST00000599398 BMT2Q1RMZ1 405 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 BMP8AQ7Z5Y6 402 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 ELMOD1Q8N336 334 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 ITFG1Q8TB96 612 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 GOLPH3LQ9H4A5 285 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 ITGA11Q9UKX5 1188 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 CDH7Q9ULB5 785 aa24.37■■□□□ 1.49
CCDC9-204ENST00000599398 MRPS23Q9Y3D9 190 aaKnown RBP24.37■■□□□ 1.49
CCDC9-204ENST00000599398 R3HCC1Q9Y3T6 440 aaKnown RBP24.37■■□□□ 1.49
CCDC9-204ENST00000599398 ZFP37Q9Y6Q3 630 aaPredicted RBP24.37■■□□□ 1.49
CCDC9-204ENST00000599398 RHOP08100 348 aa24.36■■□□□ 1.49
CCDC9-204ENST00000599398 TWF1Q12792 350 aa24.36■■□□□ 1.49
CCDC9-204ENST00000599398 BFSP1Q12934 665 aa24.36■■□□□ 1.49
CCDC9-204ENST00000599398 STK4Q13043 487 aa24.36■■□□□ 1.49
CCDC9-204ENST00000599398 PSMD2Q13200 908 aa24.36■■□□□ 1.49
CCDC9-204ENST00000599398 GPR17Q13304 367 aa24.36■■□□□ 1.49
CCDC9-204ENST00000599398 SNRNP35Q16560 246 aaKnown RBP24.36■■□□□ 1.49
CCDC9-204ENST00000599398 WSCD1Q658N2 575 aa24.36■■□□□ 1.49
CCDC9-204ENST00000599398 SUGP1Q8IWZ8 645 aaKnown RBP24.36■■□□□ 1.49
CCDC9-204ENST00000599398 THEM5Q8N1Q8 247 aa24.36■■□□□ 1.49
CCDC9-204ENST00000599398 XXYLT1Q8NBI6 393 aa24.36■■□□□ 1.49
CCDC9-204ENST00000599398 ST13P5Q8NFI4 369 aaPredicted RBP24.36■■□□□ 1.49
CCDC9-204ENST00000599398 ING5Q8WYH8 240 aa24.36■■□□□ 1.49
CCDC9-204ENST00000599398 FGF13Q92913 245 aa24.36■■□□□ 1.49
CCDC9-204ENST00000599398 TMEM209Q96SK2 561 aa24.36■■□□□ 1.49
CCDC9-204ENST00000599398 CORO1BQ9BR76 489 aa24.36■■□□□ 1.49
CCDC9-204ENST00000599398 TNNC2P02585 160 aa24.35■■□□□ 1.49
CCDC9-204ENST00000599398 RPN1P04843 607 aaKnown RBP24.35■■□□□ 1.49
CCDC9-204ENST00000599398 RBP5P82980 135 aa24.35■■□□□ 1.49
CCDC9-204ENST00000599398 IQCEQ6IPM2 695 aa24.35■■□□□ 1.49
CCDC9-204ENST00000599398 KIAA0895Q8NCT3 520 aa24.35■■□□□ 1.49
CCDC9-204ENST00000599398 OR10T2Q8NGX3 314 aa24.35■■□□□ 1.49
CCDC9-204ENST00000599398 NXPE3Q969Y0 559 aa24.35■■□□□ 1.49
CCDC9-204ENST00000599398 CCDC47Q96A33 483 aaKnown RBP24.35■■□□□ 1.49
CCDC9-204ENST00000599398 BORCS6Q96GS4 357 aa24.35■■□□□ 1.49
CCDC9-204ENST00000599398 ZNF512Q96ME7 567 aaPredicted RBP24.35■■□□□ 1.49
CCDC9-204ENST00000599398 INTS13Q9NVM9 706 aa24.35■■□□□ 1.49
CCDC9-204ENST00000599398 CGNQ9P2M7 1197 aaKnown RBP24.35■■□□□ 1.49
CCDC9-204ENST00000599398 GOLGA6L4A6NEF3 574 aa24.34■■□□□ 1.49
CCDC9-204ENST00000599398 PRR29P0C7W0 189 aa24.34■■□□□ 1.49
CCDC9-204ENST00000599398 DLATP10515 647 aaKnown RBP24.34■■□□□ 1.49
CCDC9-204ENST00000599398 DUSP4Q13115 394 aa24.34■■□□□ 1.49
CCDC9-204ENST00000599398 DUOXA2Q1HG44 320 aa24.34■■□□□ 1.49
CCDC9-204ENST00000599398 KRBA2Q6ZNG9 492 aa24.34■■□□□ 1.49
CCDC9-204ENST00000599398 LRRC52Q8N7C0 313 aa24.34■■□□□ 1.49
CCDC9-204ENST00000599398 OR5B17Q8NGF7 314 aa24.34■■□□□ 1.49
CCDC9-204ENST00000599398 FNBP1Q96RU3 617 aa24.34■■□□□ 1.49
CCDC9-204ENST00000599398 DUSP12Q9UNI6 340 aa24.34■■□□□ 1.49
CCDC9-204ENST00000599398 YIPF1Q9Y548 306 aa24.34■■□□□ 1.49
CCDC9-204ENST00000599398 PTPRJQ12913 1337 aa24.34■■□□□ 1.49
CCDC9-204ENST00000599398 ZNF318Q5VUA4 2279 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 MTMR11A4FU01 709 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 HUS1O60921 280 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 ZNF202O95125 648 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 VNN2O95498 520 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 HTR4Q13639 388 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 SLC5A9Q2M3M2 681 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 SLC39A12Q504Y0 691 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 SCARA3Q6AZY7 606 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 WDR49Q8IV35 697 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 NPAS3Q8IXF0 933 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 SLC44A3Q8N4M1 653 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 FBXL6Q8N531 539 aa24.33■■□□□ 1.49
CCDC9-204ENST00000599398 ATAD1Q8NBU5 361 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms