RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 AVENQ9NQS1 362 aaPredicted RBP13.14□□□□□ -0.31
LIG1-217ENST00000599165 AGPAT3Q9NRZ7 376 aa13.14□□□□□ -0.31
LIG1-217ENST00000599165 FAM13BQ9NYF5 915 aa13.14□□□□□ -0.31
LIG1-217ENST00000599165 RBAKQ9NYW8 714 aaPredicted RBP13.14□□□□□ -0.31
LIG1-217ENST00000599165 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.14□□□□□ -0.316e-7■■■■□ 24.2
LIG1-217ENST00000599165 IGSF9Q9P2J2 1179 aa13.14□□□□□ -0.31
LIG1-217ENST00000599165 CDH7Q9ULB5 785 aa13.14□□□□□ -0.31
LIG1-217ENST00000599165 POLIQ9UNA4 740 aa13.14□□□□□ -0.31
LIG1-217ENST00000599165 HCN4Q9Y3Q4 1203 aa13.14□□□□□ -0.31
LIG1-217ENST00000599165 COL4A2P08572 1712 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 DENND4CQ5VZ89 1909 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.13□□□□□ -0.31
LIG1-217ENST00000599165 PVALEFA0A1B0GWK0 134 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 XYLBO75191 536 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 RHOP08100 348 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 NPR3P17342 541 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 TAF6P49848 677 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 KRT85P78386 507 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 AMPD3Q01432 767 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 GPR17Q13304 367 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 PABPC1LQ4VXU2 614 aaKnown RBP13.13□□□□□ -0.31
LIG1-217ENST00000599165 WSCD1Q658N2 575 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
LIG1-217ENST00000599165 CWF19L1Q69YN2 538 aaKnown RBP13.13□□□□□ -0.31
LIG1-217ENST00000599165 OVOS1Q6IE37 1185 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 ARMCX5Q6P1M9 558 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 NT5DC4Q86YG4 428 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 PRSS33Q8NF86 280 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 OR5B17Q8NGF7 314 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 ING5Q8WYH8 240 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 TCEAL4Q96EI5 215 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 SPATA32Q96LK8 384 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 MFSD14AQ96MC6 490 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 SLC39A2Q9NP94 309 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 HSPBP1Q9NZL4 362 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 YIPF1Q9Y548 306 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 NUMBLQ9Y6R0 609 aa13.13□□□□□ -0.31
LIG1-217ENST00000599165 OBSL1O75147 1896 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 PIEZO1Q92508 2521 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 MTMR11A4FU01 709 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 OR6C75A6NL08 312 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 PRRG1O14668 218 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 LDHAP00338 332 aaKnown RBP13.12□□□□□ -0.31
LIG1-217ENST00000599165 ITGB3P05106 788 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 ODC1P11926 461 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 CPB1P15086 417 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 CEBPBP17676 345 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 POLR2BP30876 1174 aaKnown RBP13.12□□□□□ -0.31
LIG1-217ENST00000599165 PLA2G5P39877 138 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 CDR1P51861 262 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 NDUFA8P51970 172 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 EPHA5P54756 1037 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 TFAMQ00059 246 aaKnown RBP13.12□□□□□ -0.31
LIG1-217ENST00000599165 TWF1Q12792 350 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 STK4Q13043 487 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 MYBPC2Q14324 1141 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 CENPPQ6IPU0 288 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 LRRTM3Q86VH5 581 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 TMC8Q8IU68 726 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 NELFCDQ8IXH7 590 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 TMEM105Q8N8V8 129 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 ATAD1Q8NBU5 361 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 PYM1Q9BRP8 204 aaKnown RBP13.12□□□□□ -0.31
LIG1-217ENST00000599165 MTMR12Q9C0I1 747 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 ZCWPW1Q9H0M4 648 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 GDPD2Q9HCC8 539 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 NCANO14594 1321 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 UBE4BO95155 1302 aa13.12□□□□□ -0.31
LIG1-217ENST00000599165 PTPRDP23468 1912 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 KRBA1A5PL33 1030 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 KPNA7A9QM74 516 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 CYB561D2O14569 222 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 KIAA0391O15091 583 aaKnown RBP13.11□□□□□ -0.31
LIG1-217ENST00000599165 CLIC2O15247 247 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 HCRTO43612 131 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 SOAT2O75908 522 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 LRG1P02750 347 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 PAX3P23760 479 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 FCARP24071 287 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 AVPR2P30518 371 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 DUSP4Q13115 394 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 CCDC142Q17RM4 750 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 KMT5BQ4FZB7 885 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 OSTM1Q86WC4 334 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 PLEKHO2Q8TD55 490 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 CORO1BQ9BR76 489 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 OXCT2Q9BYC2 517 aaPredicted RBP13.11□□□□□ -0.31
LIG1-217ENST00000599165 TMLHEQ9NVH6 421 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 INTS13Q9NVM9 706 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 MAFFQ9ULX9 164 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 L1RE1Q9UN81 338 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 AGAP1Q9UPQ3 857 aa13.11□□□□□ -0.31
LIG1-217ENST00000599165 ZFP37Q9Y6Q3 630 aaPredicted RBP13.11□□□□□ -0.31
LIG1-217ENST00000599165 GREB1Q4ZG55 1949 aa13.1□□□□□ -0.31
LIG1-217ENST00000599165 A0A1W2PQ27 194 aa13.1□□□□□ -0.31
LIG1-217ENST00000599165 A0A1W2PQ64 194 aa13.1□□□□□ -0.31
LIG1-217ENST00000599165 A0A1W2PQD8 194 aa13.1□□□□□ -0.31
LIG1-217ENST00000599165 CFHP08603 1231 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms