RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CEP72Q9P209 647 aa14.89□□□□□ -0.03
SCAF1-203ENST00000598359 AFF4Q9UHB7 1163 aaKnown RBP14.89□□□□□ -0.03
SCAF1-203ENST00000598359 PCDHA7Q9UN72 937 aa14.89□□□□□ -0.03
SCAF1-203ENST00000598359 DERAQ9Y315 318 aa14.89□□□□□ -0.03
SCAF1-203ENST00000598359 COL4A3Q01955 1670 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 STK25O00506 426 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 POLR2DO15514 142 aaKnown RBP14.88□□□□□ -0.03
SCAF1-203ENST00000598359 SOAT2O75908 522 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 SRFP11831 508 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 ODC1P11926 461 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 PTPN2P17706 415 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 ME1P48163 572 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 GPC5P78333 572 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 ASIC1P78348 528 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 TFAMQ00059 246 aaKnown RBP14.88□□□□□ -0.03
SCAF1-203ENST00000598359 POSTNQ15063 836 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 CLEC17AQ6ZS10 378 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 RTL10Q7L3V2 364 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 GRAMD1CQ8IYS0 662 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 TTC9BQ8N6N2 239 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 NXPE3Q969Y0 559 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 TSPAN18Q96SJ8 248 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 PYM1Q9BRP8 204 aaKnown RBP14.88□□□□□ -0.03
SCAF1-203ENST00000598359 BLZF1Q9H2G9 400 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 SLC27A5Q9Y2P5 690 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 C2CD2Q9Y426 696 aa14.88□□□□□ -0.03
SCAF1-203ENST00000598359 ZFP37Q9Y6Q3 630 aaPredicted RBP14.88□□□□□ -0.03
SCAF1-203ENST00000598359 WDR87Q6ZQQ6 2873 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 CACNA1BQ00975 2339 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 H0Y858 1186 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 CYB561D2O14569 222 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 GJA1P17302 382 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 TYMPP19971 482 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 HOXD13P35453 343 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 DUSP4Q13115 394 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 PRSS36Q5K4E3 855 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 LMBRD2Q68DH5 695 aaPredicted RBP14.87□□□□□ -0.03
SCAF1-203ENST00000598359 BRSK2Q8IWQ3 736 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 IQUBQ8NA54 791 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 ATAD1Q8NBU5 361 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 OR10T2Q8NGX3 314 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 KCNG4Q8TDN1 519 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 PLA2G2FQ9BZM2 168 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 RBAKQ9NYW8 714 aaPredicted RBP14.87□□□□□ -0.03
SCAF1-203ENST00000598359 KCNH3Q9ULD8 1083 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 YIPF1Q9Y548 306 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.87□□□□□ -0.03
SCAF1-203ENST00000598359 TSC2P49815 1807 aa14.87□□□□□ -0.03
SCAF1-203ENST00000598359 OR6C75A6NL08 312 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 GALR2O43603 387 aaPredicted RBP14.86□□□□□ -0.03
SCAF1-203ENST00000598359 IL18RAPO95256 599 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 MYL4P12829 197 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 GARTP22102 1010 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 POLR2BP30876 1174 aaKnown RBP14.86□□□□□ -0.03
SCAF1-203ENST00000598359 AFMP43652 599 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 TAF6P49848 677 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 CLCN5P51795 746 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 ALCAMQ13740 583 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 RESP18Q5W5W9 173 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 WSCD1Q658N2 575 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 ARMCX5Q6P1M9 558 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 MTSS1LQ765P7 747 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 ASCL5Q7RTU5 278 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 BORCS6Q96GS4 357 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 ZSWIM3Q96MP5 696 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 RTP3Q9BQQ7 232 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 CUEDC2Q9H467 287 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 TBC1D17Q9HA65 648 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 PDE11AQ9HCR9 933 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 WNT16Q9UBV4 365 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 AGAP1Q9UPQ3 857 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 ZDHHC9Q9Y397 364 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 SCN1AP35498 2009 aa14.86□□□□□ -0.03
SCAF1-203ENST00000598359 MTMR11A4FU01 709 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 PROB1E7EW31 1015 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 EXTL3O43909 919 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 MOSPD3O75425 235 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 ITGB3P05106 788 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 AOC1P19801 751 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 RFX1P22670 979 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 NUCB2P80303 420 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 GPR17Q13304 367 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 CUL4BQ13620 913 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 SLC39A12Q504Y0 691 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 TANGO2Q6ICL3 276 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 CENPPQ6IPU0 288 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 PDZD4Q76G19 769 aaPredicted RBP14.85□□□□□ -0.03
SCAF1-203ENST00000598359 CBWD2Q8IUF1 395 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 NELFCDQ8IXH7 590 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 ELMOD1Q8N336 334 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 C1orf127Q8N9H9 656 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 ZNF512Q96ME7 567 aaPredicted RBP14.85□□□□□ -0.03
SCAF1-203ENST00000598359 C7orf25Q9BPX7 421 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 LRRC27Q9C0I9 530 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 DNAJC25Q9H1X3 360 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 TMEM206Q9H813 350 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 AVENQ9NQS1 362 aaPredicted RBP14.85□□□□□ -0.03
SCAF1-203ENST00000598359 ARHGEF3Q9NR81 526 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 SLC2A4RGQ9NR83 387 aa14.85□□□□□ -0.03
SCAF1-203ENST00000598359 PTPRJQ12913 1337 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms