RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 COQ4Q9Y3A0 265 aa23.75■■□□□ 1.39
CHMP2A-204ENST00000597848 PCDHGC5Q9Y5F6 944 aa23.75■■□□□ 1.39
CHMP2A-204ENST00000597848 MYO9BQ13459 2157 aa23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 FSCN2O14926 492 aa23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 PMM2O15305 246 aa23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 LRRN2O75325 713 aa23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 STAU1O95793 577 aaKnown RBP23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 ASS1P00966 412 aaKnown RBP23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 ATP1A3P13637 1013 aa23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 ADGRE1Q14246 886 aa23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 KIAA0319Q5VV43 1072 aa23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 SPOPLQ6IQ16 392 aa23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 PRSS55Q6UWB4 352 aaPredicted RBP23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 MRPL43Q8N983 215 aaKnown RBP23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 RNF214Q8ND24 703 aa23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 MYLIPQ8WY64 445 aa23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 LMCD1Q9NZU5 365 aa23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 LIMA1Q9UHB6 759 aaKnown RBP23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 DSEQ9UL01 958 aa23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 POLIQ9UNA4 740 aa23.74■■□□□ 1.39
CHMP2A-204ENST00000597848 PLXNA4Q9HCM2 1894 aa23.73■■□□□ 1.39
CHMP2A-204ENST00000597848 SCN1AP35498 2009 aa23.73■■□□□ 1.39
CHMP2A-204ENST00000597848 P4HA1P13674 534 aa23.73■■□□□ 1.39
CHMP2A-204ENST00000597848 TYMPP19971 482 aa23.73■■□□□ 1.39
CHMP2A-204ENST00000597848 PTPN14Q15678 1187 aa23.73■■□□□ 1.39
CHMP2A-204ENST00000597848 MIIPQ5JXC2 388 aa23.73■■□□□ 1.39
CHMP2A-204ENST00000597848 VARS2Q5ST30 1063 aaKnown RBP23.73■■□□□ 1.39
CHMP2A-204ENST00000597848 WSCD1Q658N2 575 aa23.73■■□□□ 1.39
CHMP2A-204ENST00000597848 PDXDC1Q6P996 788 aa23.73■■□□□ 1.39
CHMP2A-204ENST00000597848 ANKS3Q6ZW76 656 aa23.73■■□□□ 1.39
CHMP2A-204ENST00000597848 TOP6BLQ8N6T0 577 aa23.73■■□□□ 1.39
CHMP2A-204ENST00000597848 VRTNQ9H8Y1 702 aa23.73■■□□□ 1.39
CHMP2A-204ENST00000597848 LAMA3Q16787 3333 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 CHD9Q3L8U1 2897 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 C2orf71A6NGG8 1288 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 HIDE1A8MVS5 230 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 H7C4K7 107 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 COPB1P53618 953 aaKnown RBP23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 NOP14P78316 857 aaKnown RBP23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 YWHAHQ04917 246 aaPredicted RBP23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 LRMPQ12912 555 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 PSMD5Q16401 504 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 OVOS1Q6IE37 1185 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 GBP6Q6ZN66 633 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 PDCL2Q8N4E4 241 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 EHBP1Q8NDI1 1231 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 LNX1Q8TBB1 728 aaPredicted RBP23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 PIK3R5Q8WYR1 880 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 CRACR2AQ9BSW2 395 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 MTMR10Q9NXD2 777 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 L1RE1Q9UN81 338 aa23.72■■□□□ 1.39
CHMP2A-204ENST00000597848 CYP11A1P05108 521 aa23.71■■□□□ 1.39
CHMP2A-204ENST00000597848 SOWAHAQ2M3V2 549 aa23.71■■□□□ 1.39
CHMP2A-204ENST00000597848 CTXN3Q4LDR2 81 aa23.71■■□□□ 1.39
CHMP2A-204ENST00000597848 SCARA5Q6ZMJ2 495 aa23.71■■□□□ 1.39
CHMP2A-204ENST00000597848 DPH6Q7L8W6 267 aa23.71■■□□□ 1.39
CHMP2A-204ENST00000597848 GPR65Q8IYL9 337 aa23.71■■□□□ 1.39
CHMP2A-204ENST00000597848 MICALL1Q8N3F8 863 aa23.71■■□□□ 1.39
CHMP2A-204ENST00000597848 GUCD1Q96NT3 240 aa23.71■■□□□ 1.39
CHMP2A-204ENST00000597848 EMILIN2Q9BXX0 1053 aa23.71■■□□□ 1.39
CHMP2A-204ENST00000597848 INTS2Q9H0H0 1204 aaKnown RBP23.71■■□□□ 1.39
CHMP2A-204ENST00000597848 APOBEC3GQ9HC16 384 aaKnown RBP23.71■■□□□ 1.39
CHMP2A-204ENST00000597848 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.71■■□□□ 1.39
CHMP2A-204ENST00000597848 MTCH2Q9Y6C9 303 aa23.71■■□□□ 1.39
CHMP2A-204ENST00000597848 LRRC10BA6NIK2 292 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 LILRB3O75022 631 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 RPL17P18621 184 aaKnown RBP23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 CREMQ03060 361 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 FKBP15Q5T1M5 1219 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 ZNF280DQ6N043 979 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 RBM23Q86U06 439 aaKnown RBP23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 GLYCTKQ8IVS8 523 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 ADGRF2Q8IZF7 708 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 THEM5Q8N1Q8 247 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 TMEM86AQ8N2M4 240 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 TATDN2Q93075 761 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 PPP2R3CQ969Q6 453 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 NT5C1BQ96P26 610 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 NIF3L1Q9GZT8 377 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 TLE6Q9H808 572 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 GCNT4Q9P109 453 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 IRAK3Q9Y616 596 aa23.7■■□□□ 1.38
CHMP2A-204ENST00000597848 GTPBP10A4D1E9 387 aaKnown RBP23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 OAZ2O95190 189 aa23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 SERPINC1P01008 464 aa23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 CNPP09543 421 aaKnown RBP23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 FOSL2P15408 326 aa23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 POU3F3P20264 500 aaPredicted RBP23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 MRPL58Q14197 206 aaKnown RBP23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 EXOC3L4Q17RC7 722 aa23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 ADGRD2Q7Z7M1 963 aa23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 KLHL5Q96PQ7 755 aa23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 SNX25Q9H3E2 840 aa23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 NSUN3Q9H649 340 aaKnown RBP23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 SMYD3Q9H7B4 428 aa23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 RXFP1Q9HBX9 757 aa23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 BACE2Q9Y5Z0 518 aa23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 COL4A4P53420 1690 aaPredicted RBP23.69■■□□□ 1.38
CHMP2A-204ENST00000597848 PER2O15055 1255 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms