RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 HAPLN2Q9GZV7 340 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 FOXP1Q9H334 677 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 SLITRK6Q9H5Y7 841 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 RBM19Q9Y4C8 960 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 M0QZQ0 153 aa17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 PAPSS2O95340 614 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 CPB1P15086 417 aa17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 MARCKSP29966 332 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 CDC25AP30304 524 aa17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 DMP1Q13316 513 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 GNL2Q13823 731 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 IL17AQ16552 155 aa17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 HEATR6Q6AI08 1181 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 ARID3BQ8IVW6 561 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 IGSF22Q8N9C0 903 aa17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 SNX29Q8TEQ0 813 aa17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 ZFYVE19Q96K21 471 aa17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 NTPCRQ9BSD7 190 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 GPR88Q9GZN0 384 aa17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 DNM3Q9UQ16 869 aa17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 SLC27A5Q9Y2P5 690 aa17.93■□□□□ 0.46
SHKBP1-215ENST00000597649 MYBPHLA2RUH7 354 aa17.92■□□□□ 0.46
SHKBP1-215ENST00000597649 TOB1P50616 345 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-215ENST00000597649 KPNA1P52294 538 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-215ENST00000597649 ZBTB6Q15916 424 aa17.92■□□□□ 0.46
SHKBP1-215ENST00000597649 ST3GAL2Q16842 350 aa17.92■□□□□ 0.46
SHKBP1-215ENST00000597649 GAREM2Q75VX8 874 aa17.92■□□□□ 0.46
SHKBP1-215ENST00000597649 LONP2Q86WA8 852 aa17.92■□□□□ 0.46
SHKBP1-215ENST00000597649 FBXO18Q8NFZ0 1043 aa17.92■□□□□ 0.46
SHKBP1-215ENST00000597649 CSGALNACT1Q8TDX6 532 aa17.92■□□□□ 0.46
SHKBP1-215ENST00000597649 E2F7Q96AV8 911 aa17.92■□□□□ 0.46
SHKBP1-215ENST00000597649 C8orf33Q9H7E9 229 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-215ENST00000597649 GTSE1Q9NYZ3 720 aa17.92■□□□□ 0.46
SHKBP1-215ENST00000597649 ZZEF1O43149 2961 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 SPECC1L-ADORA2AF8WAN1 911 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 TOM1L1O75674 476 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 SOAT2O75908 522 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 CXCL8P10145 99 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 LRPAP1P30533 357 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 CNR2P34972 360 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 GUCY2FP51841 1108 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 YWHAHQ04917 246 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 CENPPQ6IPU0 288 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 YAF2Q8IY57 180 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 FAM160A2Q8N612 972 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 TTC9BQ8N6N2 239 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 ATAD1Q8NBU5 361 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 TMEM161BQ8NDZ6 487 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 DRC1Q96MC2 740 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 TMEM209Q96SK2 561 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 MMTAG2Q9BU76 263 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 ANKFY1Q9P2R3 1169 aa17.91■□□□□ 0.46
SHKBP1-215ENST00000597649 ASPMQ8IZT6 3477 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 CITO14578 2027 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 TTC26A0AVF1 554 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 PPEF2O14830 753 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 CTHP32929 405 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 AARSP49588 968 aaKnown RBP eCLIP17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 EPHB3P54753 998 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 MCL1Q07820 350 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 GPR17Q13304 367 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 CCINQ13939 588 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 LRRC32Q14392 662 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 NOLC1Q14978 699 aaKnown RBP eCLIP17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 PON2Q15165 354 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 MCTP1Q6DN14 999 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 DNAJB7Q7Z6W7 309 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 SPIRE2Q8WWL2 714 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 MSANTD3Q96H12 275 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 C17orf75Q9HAS0 396 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 PCDHB6Q9Y5E3 794 aa17.9■□□□□ 0.46
SHKBP1-215ENST00000597649 VPS37CA5D8V6 355 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-215ENST00000597649 MAPTP10636 758 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-215ENST00000597649 HOXA6P31267 233 aa17.89■□□□□ 0.45
SHKBP1-215ENST00000597649 TNFSF9P41273 254 aa17.89■□□□□ 0.45
SHKBP1-215ENST00000597649 TRAPPC10P48553 1259 aa17.89■□□□□ 0.45
SHKBP1-215ENST00000597649 CACNB1Q02641 598 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-215ENST00000597649 TNK2Q07912 1038 aa17.89■□□□□ 0.45
SHKBP1-215ENST00000597649 RAD51AP2Q09MP3 1159 aa17.89■□□□□ 0.45
SHKBP1-215ENST00000597649 DGKKQ5KSL6 1271 aa17.89■□□□□ 0.45
SHKBP1-215ENST00000597649 PKN3Q6P5Z2 889 aa17.89■□□□□ 0.45
SHKBP1-215ENST00000597649 WDR5BQ86VZ2 330 aa17.89■□□□□ 0.45
SHKBP1-215ENST00000597649 RALGPS2Q86X27 583 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-215ENST00000597649 PLEKHA5Q9HAU0 1116 aa17.89■□□□□ 0.45
SHKBP1-215ENST00000597649 MTMR11A4FU01 709 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 OR6C75A6NL08 312 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 LACTBL1A8MY62 500 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 TM4SF5O14894 197 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 AXIN1O15169 862 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 CLDN3O15551 220 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 EXTL3O43909 919 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 PRAMEF12O95522 483 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 PDIA4P13667 645 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 PLS3P13797 630 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 SYT1P21579 422 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 GUCY2CP25092 1073 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 ALDH1A3P47895 512 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 CDR1P51861 262 aa17.88■□□□□ 0.45
SHKBP1-215ENST00000597649 STRN3Q13033 797 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms