RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 KCNH3Q9ULD8 1083 aa11.37□□□□□ -0.59
LIG1-213ENST00000596672 SLC27A5Q9Y2P5 690 aa11.37□□□□□ -0.59
LIG1-213ENST00000596672 MRPS23Q9Y3D9 190 aaKnown RBP11.37□□□□□ -0.59
LIG1-213ENST00000596672 SDK1Q7Z5N4 2213 aa11.37□□□□□ -0.59
LIG1-213ENST00000596672 TICRRQ7Z2Z1 1910 aa11.37□□□□□ -0.59
LIG1-213ENST00000596672 CACNA1AO00555 2505 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 ATG2BQ96BY7 2078 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 MTMR11A4FU01 709 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 H7C4K7 107 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 SPTLC2O15270 562 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 XYLBO75191 536 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 DCNP07585 359 aaKnown RBP11.36□□□□□ -0.59
LIG1-213ENST00000596672 PTPN2P17706 415 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 VIPR2P41587 438 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 EPHA5P54756 1037 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 EHHADHQ08426 723 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 DUSP4Q13115 394 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 SNW1Q13573 536 aaKnown RBP11.36□□□□□ -0.59
LIG1-213ENST00000596672 TMEM132DQ14C87 1099 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 TPGS2Q68CL5 300 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 CENPPQ6IPU0 288 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 ZNF280DQ6N043 979 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 ELMSAN1Q6PJG2 1045 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 ASCL5Q7RTU5 278 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 MAML2Q8IZL2 1156 aaPredicted RBP11.36□□□□□ -0.59
LIG1-213ENST00000596672 DTWD2Q8NBA8 298 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 SHKBP1Q8TBC3 707 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 NXPE3Q969Y0 559 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 DDX23Q9BUQ8 820 aaKnown RBP11.36□□□□□ -0.59
LIG1-213ENST00000596672 ZSCAN16Q9H4T2 348 aaPredicted RBP11.36□□□□□ -0.59
LIG1-213ENST00000596672 PCIF1Q9H4Z3 704 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 MRPL44Q9H9J2 332 aaKnown RBP11.36□□□□□ -0.59
LIG1-213ENST00000596672 OLFML3Q9NRN5 406 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 SIX4Q9UIU6 781 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 FBXL21Q9UKT6 434 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 YIPF1Q9Y548 306 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 OBSL1O75147 1896 aa11.36□□□□□ -0.59
LIG1-213ENST00000596672 PATJQ8NI35 1801 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 PRRG1O14668 218 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 CYP11A1P05108 521 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 IDEP14735 1019 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 TYMPP19971 482 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 STAT6P42226 847 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 STARD6P59095 220 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 YWHAHQ04917 246 aaPredicted RBP11.35□□□□□ -0.59
LIG1-213ENST00000596672 GPR17Q13304 367 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 STK38Q15208 465 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 WDR44Q5JSH3 913 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 WSCD1Q658N2 575 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 LMBRD2Q68DH5 695 aaPredicted RBP11.35□□□□□ -0.59
LIG1-213ENST00000596672 DSTYKQ6XUX3 929 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 GAREM2Q75VX8 874 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 RTL10Q7L3V2 364 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 EPM2AIP1Q7L775 607 aaPredicted RBP11.35□□□□□ -0.59
LIG1-213ENST00000596672 OSTM1Q86WC4 334 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 GRAMD1CQ8IYS0 662 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 C1orf127Q8N9H9 656 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 STKLD1Q8NE28 680 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 APPL2Q8NEU8 664 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 OR5B17Q8NGF7 314 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 ATOH1Q92858 354 aaPredicted RBP11.35□□□□□ -0.59
LIG1-213ENST00000596672 FAM213AQ9BRX8 229 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 TRIM9Q9C026 710 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 MFSD1Q9H3U5 465 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 ASB7Q9H672 318 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 PDE11AQ9HCR9 933 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 ARHGEF3Q9NR81 526 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 PANK4Q9NVE7 773 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 DPP3Q9NY33 737 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 CCDC39Q9UFE4 941 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 PCDHA7Q9UN72 937 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 NME7Q9Y5B8 376 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 ZFP37Q9Y6Q3 630 aaPredicted RBP11.35□□□□□ -0.59
LIG1-213ENST00000596672 KIF26AQ9ULI4 1882 aaPredicted RBP11.35□□□□□ -0.59
LIG1-213ENST00000596672 DNAH14Q0VDD8 3507 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 GREB1Q4ZG55 1949 aa11.35□□□□□ -0.59
LIG1-213ENST00000596672 PROB1E7EW31 1015 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 TGFB1I1O43294 461 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 PPP6R2O75170 966 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 GCNT3O95395 438 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 F13A1P00488 732 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 LRG1P02750 347 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 ZSCAN22P10073 491 aaPredicted RBP11.34□□□□□ -0.59
LIG1-213ENST00000596672 CPB1P15086 417 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 GAP43P17677 238 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 ATF6P18850 670 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 GRM2Q14416 872 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 TEAD2Q15562 447 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 SLC44A4Q53GD3 710 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 OVOS1Q6IE37 1185 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 PHLDB3Q6NSJ2 640 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 VITQ6UXI7 678 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 CCDC73Q6ZRK6 1079 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 FRMD5Q7Z6J6 570 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 TMEM150AQ86TG1 271 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 BRSK2Q8IWQ3 736 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 CD302Q8IX05 232 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 POMGNT1Q8WZA1 660 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 DHX58Q96C10 678 aa11.34□□□□□ -0.59
LIG1-213ENST00000596672 HVCN1Q96D96 273 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms