RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 PDXKO00764 312 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 CYB561D2O14569 222 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 CCL16O15467 120 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 DCXO43602 365 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 NR3C1P04150 777 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 TMEM191BP0C7N4 346 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 ODC1P11926 461 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 PAX3P23760 479 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 ANP32AP39687 249 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 CASP4P49662 377 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 NTHL1P78549 312 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 UVSSAQ2YD98 709 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 SV2CQ496J9 727 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 PPM1LQ5SGD2 360 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 WSCD1Q658N2 575 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 TPGS2Q68CL5 300 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 OVOS1Q6IE37 1185 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 RNF19BQ6ZMZ0 732 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 WDR49Q8IV35 697 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 TCEAL8Q8IYN2 117 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 CSGALNACT2Q8N6G5 542 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 LRRC52Q8N7C0 313 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 GOLGA5Q8TBA6 731 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 CACTINQ8WUQ7 758 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 ZNF516Q92618 1163 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 TIGD1Q96MW7 591 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 CGRRF1Q99675 332 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 CRISPLD1Q9H336 500 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 HCFC1R1Q9NWW0 138 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 AFF4Q9UHB7 1163 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 MAPK8IP1Q9UQF2 711 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 TRAF3IP3Q9Y228 551 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 USTQ9Y2C2 406 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 NR2E1Q9Y466 385 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 MUC6Q6W4X9 2439 aa11.85□□□□□ -0.51
SHKBP1-206ENST00000595523 OR6C75A6NL08 312 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 EXOC3O60645 756 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 POU2F2P09086 479 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 DLATP10515 647 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 CPB1P15086 417 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 PNPLA4P41247 253 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 ADCY1Q08828 1119 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 SURF1Q15526 300 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 DUOXA2Q1HG44 320 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 ZCWPW2Q504Y3 356 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 TRAPPC11Q7Z392 1133 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 GRASPQ7Z6J2 395 aaPredicted RBP11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 USP37Q86T82 979 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 ZDHHC14Q8IZN3 488 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 GUF1Q8N442 669 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 TDRD5Q8NAT2 981 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 CCDC127Q96BQ5 260 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 ANKRD36BP1Q96IX9 119 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 ZNF560Q96MR9 790 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 MYADMQ96S97 322 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 PIDD1Q9HB75 910 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 GDAP2Q9NXN4 497 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 DNMT3BQ9UBC3 853 aaKnown RBP11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 L1RE1Q9UN81 338 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 PCDHA5Q9Y5H7 936 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 INSL5Q9Y5Q6 135 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 KMT2EQ8IZD2 1858 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 ANAPC1Q9H1A4 1944 aa11.84□□□□□ -0.51
SHKBP1-206ENST00000595523 MYH10P35580 1976 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 NUP210Q8TEM1 1887 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 MTMR11A4FU01 709 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 FAM86C2PA6NEL3 165 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 LRRIQ3A6PVS8 624 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 NRG2O14511 850 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 CST3P01034 146 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 TNNC2P02585 160 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 ASGR2P07307 311 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 KRT19P08727 400 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 DLG4P78352 724 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 CLDN10P78369 228 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 RBP5P82980 135 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 BFSP1Q12934 665 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 GPR17Q13304 367 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 MYBPC2Q14324 1141 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 RTL10Q7L3V2 364 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 OTOP3Q7RTS5 596 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 LIMS2Q7Z4I7 341 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 LRRTM3Q86VH5 581 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 PDCL2Q8N4E4 241 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 TTC9BQ8N6N2 239 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 CCDC47Q96A33 483 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 PGLYRP2Q96PD5 576 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 GSDMAQ96QA5 445 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 OXCT2Q9BYC2 517 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 ZCWPW1Q9H0M4 648 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 SMOC2Q9H3U7 446 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 CYP4F11Q9HBI6 524 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 DSEQ9UL01 958 aa11.83□□□□□ -0.52
SHKBP1-206ENST00000595523 PRRG1O14668 218 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 HCRTO43612 131 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 CALUO43852 315 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 XYLBO75191 536 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 ALADP13716 330 aa11.82□□□□□ -0.52
SHKBP1-206ENST00000595523 TNNI1P19237 187 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms