RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 DPP9Q86TI2 863 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 LNX1Q8TBB1 728 aaPredicted RBP16.34■□□□□ 0.21
PNKP-204ENST00000594661 MIPOL1Q8TD10 442 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 TMC2Q8TDI7 906 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 SEMA4DQ92854 862 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 LRRC45Q96CN5 670 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 IFT43Q96FT9 208 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 SYT15Q9BQS2 421 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 TARS2Q9BW92 718 aaKnown RBP16.34■□□□□ 0.21
PNKP-204ENST00000594661 MMADHCQ9H3L0 296 aaPredicted RBP16.34■□□□□ 0.21
PNKP-204ENST00000594661 SMARCAD1Q9H4L7 1026 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 UBE2TQ9NPD8 197 aaPredicted RBP16.34■□□□□ 0.21
PNKP-204ENST00000594661 DNAAF2Q9NVR5 837 aaKnown RBP16.34■□□□□ 0.21
PNKP-204ENST00000594661 DAAM1Q9Y4D1 1078 aa16.34■□□□□ 0.21
PNKP-204ENST00000594661 ATP8B3O60423 1300 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 IGKV6-21A0A0C4DH24 114 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.33■□□□□ 0.21
PNKP-204ENST00000594661 RBM47A0AV96 593 aaKnown RBP16.33■□□□□ 0.21
PNKP-204ENST00000594661 E7ENQ6 273 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 UPP2O95045 317 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 DLATP10515 647 aaKnown RBP16.33■□□□□ 0.21
PNKP-204ENST00000594661 GNAZP19086 355 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 ATP6V1C1P21283 382 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 RFX1P22670 979 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 PSMC4P43686 418 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 NLRP11P59045 1033 aaKnown RBP16.33■□□□□ 0.21
PNKP-204ENST00000594661 MYBPC3Q14896 1274 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 SETDB1Q15047 1291 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 GALNTL6Q49A17 601 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 PABPC1LQ4VXU2 614 aaKnown RBP16.33■□□□□ 0.21
PNKP-204ENST00000594661 ODF2Q5BJF6 829 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 KRT39Q6A163 491 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 MYLK4Q86YV6 388 aaPredicted RBP16.33■□□□□ 0.21
PNKP-204ENST00000594661 GLYCTKQ8IVS8 523 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 MAML3Q96JK9 1138 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 SLX1AQ9BQ83 275 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 ZCWPW1Q9H0M4 648 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 TMEM134Q9H6X4 195 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 TMEM8AQ9HCN3 771 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 CTNNAL1Q9UBT7 734 aa16.33■□□□□ 0.21
PNKP-204ENST00000594661 TTLL13PA6NNM8 815 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 FOXN3O00409 490 aaPredicted RBP16.33■□□□□ 0.2
PNKP-204ENST00000594661 EXTL3O43909 919 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 SLC26A2P50443 739 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 WNT7BP56706 349 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 LAMTOR4Q0VGL1 99 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 IER5Q5VY09 327 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 PLEKHH3Q7Z736 793 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 SLC30A5Q8TAD4 765 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 MAIP1Q8WWC4 291 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 PSPC1Q8WXF1 523 aaKnown RBP16.33■□□□□ 0.2
PNKP-204ENST00000594661 KAT5Q92993 513 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 ISCUQ9H1K1 167 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 RNPEPQ9H4A4 650 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 GOLPH3Q9H4A6 298 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 ARHGEF3Q9NR81 526 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.33■□□□□ 0.2
PNKP-204ENST00000594661 ANKFY1Q9P2R3 1169 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 CPA4Q9UI42 421 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 AGO2Q9UKV8 859 aaKnown RBP16.33■□□□□ 0.2
PNKP-204ENST00000594661 INTUQ9ULD6 942 aa16.33■□□□□ 0.2
PNKP-204ENST00000594661 NOVA2Q9UNW9 492 aaKnown RBP16.33■□□□□ 0.2
PNKP-204ENST00000594661 IGF2BP3O00425 579 aaKnown RBP eCLIP16.32■□□□□ 0.2
PNKP-204ENST00000594661 GH1P01241 217 aa16.32■□□□□ 0.2
PNKP-204ENST00000594661 LGALS2P05162 132 aa16.32■□□□□ 0.2
PNKP-204ENST00000594661 ECHS1P30084 290 aa16.32■□□□□ 0.2
PNKP-204ENST00000594661 ACOT2P49753 483 aa16.32■□□□□ 0.2
PNKP-204ENST00000594661 LAMC2Q13753 1193 aa16.32■□□□□ 0.2
PNKP-204ENST00000594661 RPS6KA1Q15418 735 aa16.32■□□□□ 0.2
PNKP-204ENST00000594661 FAM133BQ5BKY9 247 aaKnown RBP16.32■□□□□ 0.2
PNKP-204ENST00000594661 ZBTB41Q5SVQ8 909 aa16.32■□□□□ 0.2
PNKP-204ENST00000594661 ACBD5Q5T8D3 534 aaPredicted RBP16.32■□□□□ 0.2
PNKP-204ENST00000594661 RASAL3Q86YV0 1011 aa16.32■□□□□ 0.2
PNKP-204ENST00000594661 TPCN2Q8NHX9 752 aa16.32■□□□□ 0.2
PNKP-204ENST00000594661 TAS1R2Q8TE23 839 aa16.32■□□□□ 0.2
PNKP-204ENST00000594661 TAF4BQ92750 862 aa16.32■□□□□ 0.2
PNKP-204ENST00000594661 TLCD1Q96CP7 247 aa16.32■□□□□ 0.2
PNKP-204ENST00000594661 UBE2OQ9C0C9 1292 aaKnown RBP16.32■□□□□ 0.2
PNKP-204ENST00000594661 HBP1O60381 514 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 PENKP01210 267 aaPredicted RBP16.31■□□□□ 0.2
PNKP-204ENST00000594661 GJB1P08034 283 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 KRT16P08779 473 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 SRGAP2CP0DJJ0 459 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 SP100P23497 879 aaPredicted RBP16.31■□□□□ 0.2
PNKP-204ENST00000594661 CTNNA1P35221 906 aaKnown RBP16.31■□□□□ 0.2
PNKP-204ENST00000594661 MSH2P43246 934 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 GALCP54803 685 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 MAGOHP61326 146 aaKnown RBP16.31■□□□□ 0.2
PNKP-204ENST00000594661 LACTBP83111 547 aaPredicted RBP16.31■□□□□ 0.2
PNKP-204ENST00000594661 ATP11AP98196 1134 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 SV2AQ7L0J3 742 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 LRRC57Q8N9N7 239 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 OR2W6PQ8NHA6 318 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 NPLOC4Q8TAT6 608 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 AFG1LQ8WV93 481 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 MAGOHBQ96A72 148 aaKnown RBP16.31■□□□□ 0.2
PNKP-204ENST00000594661 ELMO3Q96BJ8 720 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 SYT11Q9BT88 431 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 CCDC113Q9H0I3 377 aa16.31■□□□□ 0.2
PNKP-204ENST00000594661 SEPT11Q9NVA2 429 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms