RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SLC5A4Q9NY91 659 aa17.47■□□□□ 0.39
LIG1-206ENST00000594067 ZSCAN5DPP0CG00 497 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 CLDN10P78369 228 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 STAT4Q14765 748 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 HP1BP3Q5SSJ5 553 aaPredicted RBP17.46■□□□□ 0.39
LIG1-206ENST00000594067 RTKN2Q8IZC4 609 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 RBBP8NLQ8NC74 664 aaPredicted RBP17.46■□□□□ 0.39
LIG1-206ENST00000594067 EXD1Q8NHP7 514 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 ZBED3Q96IU2 234 aaPredicted RBP17.46■□□□□ 0.39
LIG1-206ENST00000594067 PAIP2Q9BPZ3 127 aaKnown RBP17.46■□□□□ 0.39
LIG1-206ENST00000594067 FHDC1Q9C0D6 1143 aaPredicted RBP17.46■□□□□ 0.39
LIG1-206ENST00000594067 JPH1Q9HDC5 661 aaPredicted RBP17.46■□□□□ 0.39
LIG1-206ENST00000594067 RASA4BC9J798 803 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 RASA4O43374 803 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 CCNB1P14635 433 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 ETS1P14921 441 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 ACTR2P61160 394 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 RPL7AP62424 266 aaKnown RBP17.46■□□□□ 0.39
LIG1-206ENST00000594067 STRN3Q13033 797 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 MKRN3Q13064 507 aaKnown RBP17.46■□□□□ 0.39
LIG1-206ENST00000594067 TMEM63BQ5T3F8 832 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 PLEKHA7Q6IQ23 1121 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 MIS18BP1Q6P0N0 1132 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 ARHGEF18Q6ZSZ5 1173 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 AGBL3Q8NEM8 1001 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 SAYSD1Q9NPB0 183 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 DNPEPQ9ULA0 475 aa17.46■□□□□ 0.39
LIG1-206ENST00000594067 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.46■□□□□ 0.39
LIG1-206ENST00000594067 POTEJP0CG39 1038 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 ATF7P17544 494 aaPredicted RBP17.45■□□□□ 0.38
LIG1-206ENST00000594067 FOXN2P32314 431 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 RTP1P59025 263 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 ENPEPQ07075 957 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 NFX1Q12986 1120 aaKnown RBP17.45■□□□□ 0.38
LIG1-206ENST00000594067 SEZ6Q53EL9 994 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 RNF43Q68DV7 783 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 ECHDC2Q86YB7 292 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 FEZF2Q8TBJ5 459 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 MAGEB18Q96M61 343 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 KIAA1586Q9HCI6 787 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 RBAKQ9NYW8 714 aaPredicted RBP17.45■□□□□ 0.38
LIG1-206ENST00000594067 KLHL14Q9P2G3 628 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 ANKFY1Q9P2R3 1169 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 SLC9A2Q9UBY0 812 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 NUB1Q9Y5A7 615 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 PSME4Q14997 1843 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 DKC1O60832 514 aaKnown RBP eCLIP17.45■□□□□ 0.381e-6■■□□□ 12.5
LIG1-206ENST00000594067 SPAG7O75391 227 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 EMC2Q15006 297 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 TRIM72Q6ZMU5 477 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 CAPN12Q6ZSI9 719 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 FAM47EQ6ZV65 393 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 PHF13Q86YI8 300 aaPredicted RBP17.45■□□□□ 0.38
LIG1-206ENST00000594067 ZCCHC9Q8N567 271 aaKnown RBP17.45■□□□□ 0.38
LIG1-206ENST00000594067 MYOZ2Q9NPC6 264 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 ZNRF3Q9ULT6 936 aa17.45■□□□□ 0.38
LIG1-206ENST00000594067 SKIV2L2P42285 1042 aaKnown RBP17.44■□□□□ 0.38
LIG1-206ENST00000594067 POLGP54098 1239 aaPredicted RBP17.44■□□□□ 0.38
LIG1-206ENST00000594067 CXCL9Q07325 125 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 MTFR1Q15390 333 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 SNRNP48Q6IEG0 339 aaKnown RBP17.44■□□□□ 0.38
LIG1-206ENST00000594067 NIM1KQ8IY84 436 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 OR5B17Q8NGF7 314 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 ASAP3Q8TDY4 903 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 TEPSINQ96N21 525 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 EURLQ9NYK6 297 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 ZNF148Q9UQR1 794 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 SCINQ9Y6U3 715 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 LRRIQ4A6NIV6 560 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 UNC5CO95185 931 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 EGFRP00533 1210 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 HARSP12081 509 aaKnown RBP17.44■□□□□ 0.38
LIG1-206ENST00000594067 TAC1P20366 129 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 CDC25CP30307 473 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 XRRA1Q6P2D8 792 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 MFSD7Q6UXD7 560 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 ABHD15Q6UXT9 468 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 MAML1Q92585 1016 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 UTP4Q969X6 686 aaKnown RBP17.44■□□□□ 0.38
LIG1-206ENST00000594067 ACSF2Q96CM8 615 aaPredicted RBP17.44■□□□□ 0.38
LIG1-206ENST00000594067 HAUS1Q96CS2 278 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 TARS2Q9BW92 718 aaKnown RBP17.44■□□□□ 0.38
LIG1-206ENST00000594067 EXOC1LA0A1B0GW35 172 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 POC1B-GALNT4F8VUJ3 575 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 MAFGO15525 162 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 LIASO43766 372 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 KRT1P04264 644 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 CCNG1P51959 295 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 WDR4P57081 412 aaKnown RBP17.44■□□□□ 0.38
LIG1-206ENST00000594067 NOP14P78316 857 aaKnown RBP17.44■□□□□ 0.38
LIG1-206ENST00000594067 ACVR2BQ13705 512 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 FASTKD3Q14CZ7 662 aaKnown RBP17.44■□□□□ 0.38
LIG1-206ENST00000594067 RELL1Q8IUW5 271 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 VCPIP1Q96JH7 1222 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 MSTO1Q9BUK6 570 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 PARVAQ9NVD7 372 aa17.44■□□□□ 0.38
LIG1-206ENST00000594067 H0YCG3 227 aa17.43■□□□□ 0.38
LIG1-206ENST00000594067 DNALI1O14645 258 aaPredicted RBP17.43■□□□□ 0.38
LIG1-206ENST00000594067 ATP2A2P16615 1042 aaKnown RBP17.43■□□□□ 0.38
LIG1-206ENST00000594067 LACTBP83111 547 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms