RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 COL1A2P08123 1366 aa20.94■□□□□ 0.94
CLIP3-206ENST00000593074 H3BRB1 525 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 TNNC2P02585 160 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 SMPD1P17405 629 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 TMOD1P28289 359 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 MAN1A1P33908 653 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 RPL21P46778 160 aaKnown RBP20.93■□□□□ 0.94
CLIP3-206ENST00000593074 ZNF844Q08AG5 666 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 IQSEC1Q6DN90 963 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.93■□□□□ 0.94
CLIP3-206ENST00000593074 UBLCP1Q8WVY7 318 aaPredicted RBP20.93■□□□□ 0.94
CLIP3-206ENST00000593074 TUT1Q9H6E5 874 aaKnown RBP20.93■□□□□ 0.94
CLIP3-206ENST00000593074 PARVAQ9NVD7 372 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 SNX24Q9Y343 169 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 EVPLQ92817 2033 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 MGAMO43451 1857 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 AMHR2Q16671 573 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 KCTD16Q68DU8 428 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 LRRC31Q6UY01 552 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 CCDC105Q8IYK2 499 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 NPLOC4Q8TAT6 608 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 MAIP1Q8WWC4 291 aa20.93■□□□□ 0.94
CLIP3-206ENST00000593074 GOLGA6L10A6NI86 522 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 ERLIN2O94905 339 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 CXCL8P10145 99 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 CD58P19256 250 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 CDH5P33151 784 aaPredicted RBP20.92■□□□□ 0.94
CLIP3-206ENST00000593074 HUNKP57058 714 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 OSTNP61366 133 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 KDM7AQ6ZMT4 941 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 CDR2LQ86X02 465 aaPredicted RBP20.92■□□□□ 0.94
CLIP3-206ENST00000593074 FBXO25Q8TCJ0 367 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 CAPS2Q9BXY5 557 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 RPF1Q9H9Y2 349 aaKnown RBP20.92■□□□□ 0.94
CLIP3-206ENST00000593074 PARP2Q9UGN5 583 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 AKT3Q9Y243 479 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 MYZAPP0CAP1 466 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 BRD2P25440 801 aaKnown RBP20.92■□□□□ 0.94
CLIP3-206ENST00000593074 SGO2Q562F6 1265 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 RHOT1Q8IXI2 618 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 TMEM192Q8IY95 271 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 OR6J1Q8NGC5 347 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 OR2W6PQ8NHA6 318 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 FAM129AQ9BZQ8 928 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 ZNF518BQ9C0D4 1074 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 CPA4Q9UI42 421 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 PCDHGC3Q9UN70 934 aa20.92■□□□□ 0.94
CLIP3-206ENST00000593074 PASKQ96RG2 1323 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 A0A087WZ62 844 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 TCRBV5S1A1TA0A578 114 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 GPR25O00155 361 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 ECEL1O95672 775 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 CALB1P05937 261 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 IVLP07476 585 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 MCF2P10911 925 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 PLTPP55058 493 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 MTHFD1LQ6UB35 978 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 KATNAL2Q8IYT4 538 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 FEZF2Q8TBJ5 459 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 PKNOX2Q96KN3 472 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 FDXACB1Q9BRP7 624 aaPredicted RBP20.91■□□□□ 0.94
CLIP3-206ENST00000593074 GRIN2DO15399 1336 aa20.91■□□□□ 0.94
CLIP3-206ENST00000593074 A6NNZ2 444 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 TLR3O15455 904 aaKnown RBP20.9■□□□□ 0.94
CLIP3-206ENST00000593074 MMP3P08254 477 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 WEE2P0C1S8 567 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 NR1D1P20393 614 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 TAS2R40P59535 323 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 YWHAEP62258 255 aaKnown RBP20.9■□□□□ 0.94
CLIP3-206ENST00000593074 DGKDQ16760 1214 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 TUBB8Q3ZCM7 444 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 DAB2IPQ5VWQ8 1189 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 SCARA5Q6ZMJ2 495 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 TMEM35BQ8NCS4 154 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 FAXDC2Q96IV6 333 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 HERPUD2Q9BSE4 406 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 SIX4Q9UIU6 781 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 ATP8A1Q9Y2Q0 1164 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 HOXD8P13378 290 aaPredicted RBP20.9■□□□□ 0.94
CLIP3-206ENST00000593074 EIF4BP23588 611 aaKnown RBP20.9■□□□□ 0.94
CLIP3-206ENST00000593074 IRAK1P51617 712 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 TNFAIP2Q03169 654 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 KLF1Q13351 362 aaPredicted RBP20.9■□□□□ 0.94
CLIP3-206ENST00000593074 RUFY4Q6ZNE9 571 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 BCO2Q9BYV7 579 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 EPB41L4BQ9H329 900 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 PDZD7Q9H5P4 517 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 IP6K2Q9UHH9 426 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 LCMT1Q9UIC8 334 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 PTPN22Q9Y2R2 807 aa20.9■□□□□ 0.94
CLIP3-206ENST00000593074 O00370 1275 aa20.89■□□□□ 0.93
CLIP3-206ENST00000593074 MEFVO15553 781 aaPredicted RBP20.89■□□□□ 0.93
CLIP3-206ENST00000593074 NFICP08651 508 aa20.89■□□□□ 0.93
CLIP3-206ENST00000593074 KCNJ1P48048 391 aa20.89■□□□□ 0.93
CLIP3-206ENST00000593074 ZNF394Q53GI3 561 aa20.89■□□□□ 0.93
CLIP3-206ENST00000593074 DNAJC21Q5F1R6 531 aaKnown RBP20.89■□□□□ 0.93
CLIP3-206ENST00000593074 C1orf127Q8N9H9 656 aa20.89■□□□□ 0.93
CLIP3-206ENST00000593074 TFAP2BQ92481 460 aa20.89■□□□□ 0.93
CLIP3-206ENST00000593074 TMEM191CA6NGB0 347 aa20.89■□□□□ 0.93
CLIP3-206ENST00000593074 VTNP04004 478 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms