RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 TAS1R1Q7RTX1 841 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 DDX53Q86TM3 631 aaKnown RBP10.39□□□□□ -0.75
DDX39A-220ENST00000593008 ARHGEF19Q8IW93 802 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 FAM114A1Q8IWE2 563 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 EFHBQ8N7U6 833 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 MRPL43Q8N983 215 aaKnown RBP10.39□□□□□ -0.75
DDX39A-220ENST00000593008 ARID3AQ99856 593 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 TMEM175Q9BSA9 504 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 APOL5Q9BWW9 433 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 XPO4Q9C0E2 1151 aaKnown RBP10.39□□□□□ -0.75
DDX39A-220ENST00000593008 INTS2Q9H0H0 1204 aaKnown RBP10.39□□□□□ -0.75
DDX39A-220ENST00000593008 NDST4Q9H3R1 872 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 ASB7Q9H672 318 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 PLEKHA5Q9HAU0 1116 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 NGRNQ9NPE2 291 aaKnown RBP10.39□□□□□ -0.75
DDX39A-220ENST00000593008 CLEC1BQ9P126 229 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 UBQLN1Q9UMX0 589 aaKnown RBP10.39□□□□□ -0.75
DDX39A-220ENST00000593008 AGAP1Q9UPQ3 857 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 C2CD2Q9Y426 696 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 SCN1AP35498 2009 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 ATG2AQ2TAZ0 1938 aa10.39□□□□□ -0.75
DDX39A-220ENST00000593008 TSC2P49815 1807 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 A0A1B0GTH6 734 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 CARNS1A5YM72 827 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 GRXCR2A6NFK2 248 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 C2CD2LO14523 706 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 CLSTN1O94985 981 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 FGFR1OPO95684 399 aaKnown RBP10.38□□□□□ -0.75
DDX39A-220ENST00000593008 CAVIN2O95810 425 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 SERPINC1P01008 464 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 CALCAP01258 141 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 TNNC2P02585 160 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 PNMA6AP0CW24 399 aaPredicted RBP10.38□□□□□ -0.75
DDX39A-220ENST00000593008 TUSC3Q13454 348 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 NCOA4Q13772 614 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 UPP1Q16831 310 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 CCDC142Q17RM4 750 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 DUOXA2Q1HG44 320 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 BEST2Q8NFU1 509 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 LMO3Q8TAP4 145 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 ANKRD36BP1Q96IX9 119 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 LSM14BQ9BX40 385 aaKnown RBP10.38□□□□□ -0.75
DDX39A-220ENST00000593008 ZBP1Q9H171 429 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 SDCBP2Q9H190 292 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 XYLT2Q9H1B5 865 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 SMYD3Q9H7B4 428 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 METTL14Q9HCE5 456 aaKnown RBP10.38□□□□□ -0.75
DDX39A-220ENST00000593008 TMEM8AQ9HCN3 771 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 SIX2Q9NPC8 291 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 GCNT4Q9P109 453 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 CD207Q9UJ71 328 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 NUB1Q9Y5A7 615 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 NME7Q9Y5B8 376 aa10.38□□□□□ -0.75
DDX39A-220ENST00000593008 ANO9A1A5B4 782 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 PIRO00625 290 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 CLASP2O75122 1294 aaKnown RBP10.37□□□□□ -0.75
DDX39A-220ENST00000593008 PHACTR2O75167 634 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 CTSAP10619 480 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 LRPAP1P30533 357 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 UBXN1Q04323 297 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 GOLGA8FQ08AF8 430 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 GOLGA8DPQ0D2H9 430 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 ORC1Q13415 861 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 BMS1Q14692 1282 aaKnown RBP10.37□□□□□ -0.75
DDX39A-220ENST00000593008 SYCP1Q15431 976 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 KRT39Q6A163 491 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 OSTM1Q86WC4 334 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 CD302Q8IX05 232 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 TATDN2Q93075 761 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 MSLNLQ96KJ4 702 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 CDCA3Q99618 268 aaPredicted RBP10.37□□□□□ -0.75
DDX39A-220ENST00000593008 COLEC11Q9BWP8 271 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 RTN4Q9NQC3 1192 aaKnown RBP10.37□□□□□ -0.75
DDX39A-220ENST00000593008 HMGXB4Q9UGU5 601 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 SIK3Q9Y2K2 1263 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 DERAQ9Y315 318 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 TIMM13Q9Y5L4 95 aaPredicted RBP10.37□□□□□ -0.75
DDX39A-220ENST00000593008 C5orf42Q9H799 3197 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 TCF20Q9UGU0 1960 aaKnown RBP10.37□□□□□ -0.75
DDX39A-220ENST00000593008 BDP1A6H8Y1 2624 aa10.37□□□□□ -0.75
DDX39A-220ENST00000593008 RNF225M0QZC1 329 aaPredicted RBP10.36□□□□□ -0.75
DDX39A-220ENST00000593008 TNFRSF10AO00220 468 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 TADA2AO75478 443 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 CYP3A5P20815 502 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 PON1P27169 355 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 ASPAP45381 313 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 ZNF75DP51815 510 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 TPM4P67936 248 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 NOP14P78316 857 aaKnown RBP10.36□□□□□ -0.75
DDX39A-220ENST00000593008 NR1I3Q14994 352 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 SURF1Q15526 300 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 PTPN14Q15678 1187 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 ZNF699Q32M78 642 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 HPDLQ96IR7 371 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 LPIN3Q9BQK8 851 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 GPR62Q9BZJ7 368 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 GRPEL1Q9HAV7 217 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 CD320Q9NPF0 282 aa10.36□□□□□ -0.75
DDX39A-220ENST00000593008 FAM207AQ9NSI2 230 aaPredicted RBP10.36□□□□□ -0.75
DDX39A-220ENST00000593008 NXF1Q9UBU9 619 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms