RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 RAC3P60763 192 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 RAB32Q13637 225 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 BMT2Q1RMZ1 405 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 MPEG1Q2M385 716 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 PGBD2Q6P3X8 592 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 TLDC1Q6P9B6 456 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 DOK3Q7L591 496 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 APBB1IPQ7Z5R6 666 aaPredicted RBP7.56□□□□□ -1.2
VMP1-215ENST00000592619 TMEM151BQ8IW70 566 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 CPXCR1Q8N123 301 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 AOPEPQ8N6M6 819 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 SPATA5Q8NB90 893 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 SHCBP1Q8NEM2 672 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 DDX17Q92841 729 aaKnown RBP7.56□□□□□ -1.2
VMP1-215ENST00000592619 SNX22Q96L94 193 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 AGO4Q9HCK5 861 aaKnown RBP7.56□□□□□ -1.2
VMP1-215ENST00000592619 SLAMF7Q9NQ25 335 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 ARHGEF11O15085 1522 aa7.56□□□□□ -1.2
VMP1-215ENST00000592619 PRXQ9BXM0 1461 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 B4GALT4O60513 344 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 HAUS5O94927 633 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 MT-ND5P03915 603 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 GNAI2P04899 355 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 C1QTNF9P0C862 333 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 HARSP12081 509 aaKnown RBP7.55□□□□□ -1.2
VMP1-215ENST00000592619 GRK6P43250 576 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 LINC00310P59036 64 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 MXRA7P84157 204 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 ICA1Q05084 483 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 CTBP1Q13363 440 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 UBXN2BQ14CS0 331 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 SLC35G1Q2M3R5 365 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 LMBRD2Q68DH5 695 aaPredicted RBP7.55□□□□□ -1.2
VMP1-215ENST00000592619 CCDC174Q6PII3 467 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 BEND5Q7L4P6 421 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 NME8Q8N427 588 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 IQCDQ96DY2 449 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 SCLT1Q96NL6 688 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 EIF2AQ9BY44 585 aaKnown RBP7.55□□□□□ -1.2
VMP1-215ENST00000592619 NELFAQ9H3P2 528 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 AGO3Q9H9G7 860 aaKnown RBP7.55□□□□□ -1.2
VMP1-215ENST00000592619 A1CFQ9NQ94 594 aaKnown RBP7.55□□□□□ -1.2
VMP1-215ENST00000592619 PLEKHM1Q9Y4G2 1056 aa7.55□□□□□ -1.2
VMP1-215ENST00000592619 CTTNBP2Q8WZ74 1663 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 KIAA0586Q9BVV6 1533 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 A0A1W2PRX2 142 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 CLCA1A8K7I4 914 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 AREL1O15033 823 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 FFAR2O15552 330 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 B4GALT3O60512 393 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 PPFIA4O75335 1185 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 CNOT4O95628 575 aaKnown RBP7.54□□□□□ -1.2
VMP1-215ENST00000592619 TSPAN15O95858 294 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 POMCP01189 267 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 EEF1GP26641 437 aaKnown RBP7.54□□□□□ -1.2
VMP1-215ENST00000592619 PHKA1P46020 1223 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 PPM1FP49593 454 aaPredicted RBP7.54□□□□□ -1.2
VMP1-215ENST00000592619 POU6F2P78424 691 aaPredicted RBP7.54□□□□□ -1.2
VMP1-215ENST00000592619 DUSP8Q13202 625 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 PUM3Q15397 648 aaKnown RBP7.54□□□□□ -1.2
VMP1-215ENST00000592619 ANKS6Q68DC2 871 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 CATSPERGQ6ZRH7 1159 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 GPRIN1Q7Z2K8 1008 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 GPR135Q8IZ08 494 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 SDR16C5Q8N3Y7 309 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 ZNF527Q8NB42 609 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 SCAMP4Q969E2 229 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 ISCA1Q9BUE6 129 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 SEC61A2Q9H9S3 476 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 CEP83Q9Y592 693 aa7.54□□□□□ -1.2
VMP1-215ENST00000592619 A0A087WWL8 130 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 MBD3L4A6NDZ8 208 aaPredicted RBP7.53□□□□□ -1.2
VMP1-215ENST00000592619 MBD3L3A6NE82 208 aaPredicted RBP7.53□□□□□ -1.2
VMP1-215ENST00000592619 HNRNPDLO14979 420 aaKnown RBP7.53□□□□□ -1.2
VMP1-215ENST00000592619 THAP12O43422 761 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 TLR5O60602 858 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 DNAJB5O75953 348 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 STC2O76061 302 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 CHEK2O96017 543 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 CHKAP35790 457 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 SLURP1P55000 103 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 TCF15Q12870 199 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 BLMHQ13867 455 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 STARD3Q14849 445 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 FAM111BQ6SJ93 734 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 UBE3BQ7Z3V4 1068 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 FANCBQ8NB91 859 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 ZFP28Q8NHY6 868 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 CCT6BQ92526 530 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 ZNF566Q969W8 418 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 NEIL1Q96FI4 390 aaPredicted RBP7.53□□□□□ -1.2
VMP1-215ENST00000592619 ZNF512Q96ME7 567 aaPredicted RBP7.53□□□□□ -1.2
VMP1-215ENST00000592619 STK33Q9BYT3 514 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 GSTO2Q9H4Y5 243 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 OAZ3Q9UMX2 235 aa7.53□□□□□ -1.2
VMP1-215ENST00000592619 KIF21BO75037 1637 aa7.52□□□□□ -1.2
VMP1-215ENST00000592619 IQGAP2Q13576 1575 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 GOLGA6L3A6NEY3 463 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 PYCARD-AS1I3L0S3 204 aa7.52□□□□□ -1.21
VMP1-215ENST00000592619 NPHP1O15259 732 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms