RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 ENDOVQ8N8Q3 282 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 LRRC8CQ8TDW0 803 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 STK32AQ8WU08 396 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 BSNDQ8WZ55 320 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 SPDL1Q96EA4 605 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 FHDC1Q9C0D6 1143 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 SLC24A2Q9UI40 661 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 DRG1Q9Y295 367 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 NFIBO00712 420 aa15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 CD58P19256 250 aa15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 RPA3P35244 121 aaPredicted RBP15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 ABL2P42684 1182 aa15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 NOMO3P69849 1222 aa15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 GRIK3Q13003 919 aa15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 WASHC2DQ5SRD0 308 aa15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 CDCA2Q69YH5 1023 aaPredicted RBP15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 CAPRIN2Q6IMN6 1127 aaKnown RBP15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 RCOR2Q8IZ40 523 aa15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 SAMD3Q8N6K7 520 aa15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 TEX9Q8N6V9 391 aa15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 GLIS1Q8NBF1 620 aa15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 C11orf70Q9BRQ4 267 aa15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 TBC1D10AQ9BXI6 508 aa15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 SSU72Q9NP77 194 aaKnown RBP15.71■□□□□ 0.1
SMARCA4-219ENST00000592604 A6NHS1 94 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 POC1B-GALNT4F8VUJ3 575 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 TPBGLP0DKB5 382 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 PECAM1P16284 738 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 KRT15P19012 456 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 ACO1P21399 889 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 SFNP31947 248 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 CAP2P40123 477 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 MORF4L2Q15014 288 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 SLC1A5Q15758 541 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 EAPPQ56P03 285 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 BRDTQ58F21 947 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 NLGN1Q8N2Q7 840 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 ALLCQ8N6M5 410 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 TLE6Q9H808 572 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 KIF9Q9HAQ2 790 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 DNPEPQ9ULA0 475 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 RPS6KL1Q9Y6S9 549 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 SCINQ9Y6U3 715 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 SKAP2O75563 359 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 SLC45A4Q5BKX6 768 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 ANO5Q75V66 913 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 MCF2L2Q86YR7 1114 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 ABRAQ8N0Z2 381 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 ZNF398Q8TD17 642 aa15.7■□□□□ 0.1
SMARCA4-219ENST00000592604 WDR64B1ANS9 1081 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 TLR3O15455 904 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 GM2AP17900 193 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 CA4P22748 312 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 FASTKD3Q14CZ7 662 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 ZYXQ15942 572 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 C11orf91Q3C1V1 193 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 ZACNQ401N2 412 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 WDR44Q5JSH3 913 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 PPP1R2P3Q6NXS1 205 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 LONP2Q86WA8 852 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 KCNV2Q8TDN2 545 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 RBM41Q96IZ5 413 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 C2CD2LO14523 706 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 CCNE2O96020 404 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 CFHP08603 1231 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 ARSEP51690 589 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 C1QBPQ07021 282 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 C4orf33Q8N1A6 199 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 FEZF2Q8TBJ5 459 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 FAM151AQ8WW52 585 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 GJD4Q96KN9 370 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 SLITRK1Q96PX8 696 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 FAM213AQ9BRX8 229 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 SAR1AQ9NR31 198 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 LNPEPQ9UIQ6 1025 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 ZNF148Q9UQR1 794 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 USTQ9Y2C2 406 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 WDR81Q562E7 1941 aa15.69■□□□□ 0.1
SMARCA4-219ENST00000592604 TCP10L2B9ZVM9 353 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 NDC80O14777 642 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 ATP9AO75110 1047 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 ZBED4O75132 1171 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 TJP3O95049 919 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 C4BPAP04003 597 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 ZSCAN5DPP0CG00 497 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 CDC25CP30307 473 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 KRT76Q01546 638 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 MCL1Q07820 350 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 RNASEH2BQ5TBB1 312 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 OTOAQ7RTW8 1153 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 TRMT1LQ7Z2T5 733 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 SYTL5Q8TDW5 730 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 MICAL1Q8TDZ2 1067 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 ZNF75CPQ92670 426 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 MAP3K20Q9NYL2 800 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 FETUBQ9UGM5 382 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 IP6K2Q9UHH9 426 aa15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 HNRNPDLO14979 420 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-219ENST00000592604 ONECUT3O60422 494 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms