RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 UNCXA6NJT0 531 aa20.94■□□□□ 0.94
MBD3-209ENST00000592012 STRNO43815 780 aa20.94■□□□□ 0.94
MBD3-209ENST00000592012 IL18RAPO95256 599 aa20.94■□□□□ 0.94
MBD3-209ENST00000592012 ADCYAP1R1P41586 468 aa20.94■□□□□ 0.94
MBD3-209ENST00000592012 RPL7AP62424 266 aaKnown RBP20.94■□□□□ 0.94
MBD3-209ENST00000592012 IFNLR1Q8IU57 520 aaPredicted RBP20.94■□□□□ 0.94
MBD3-209ENST00000592012 WDTC1Q8N5D0 677 aa20.94■□□□□ 0.94
MBD3-209ENST00000592012 TFAP2BQ92481 460 aa20.94■□□□□ 0.94
MBD3-209ENST00000592012 FDXACB1Q9BRP7 624 aaPredicted RBP20.94■□□□□ 0.94
MBD3-209ENST00000592012 C16orf70Q9BSU1 422 aa20.94■□□□□ 0.94
MBD3-209ENST00000592012 EPB41L4BQ9H329 900 aa20.94■□□□□ 0.94
MBD3-209ENST00000592012 ZNF408Q9H9D4 720 aa20.94■□□□□ 0.94
MBD3-209ENST00000592012 PARP2Q9UGN5 583 aa20.94■□□□□ 0.94
MBD3-209ENST00000592012 PLXNB2O15031 1838 aa20.94■□□□□ 0.94
MBD3-209ENST00000592012 SCN4AP35499 1836 aa20.94■□□□□ 0.94
MBD3-209ENST00000592012 GRIN2DO15399 1336 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 PASKQ96RG2 1323 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 IQCA1LA6NCM1 817 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 A6NNZ2 444 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 ECEL1O95672 775 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 NR1D1P20393 614 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 ATP1A2P50993 1020 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 TUBB8Q3ZCM7 444 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 FOXR1Q6PIV2 292 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 SCARA5Q6ZMJ2 495 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 RUFY4Q6ZNE9 571 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 PNMA8AQ86V59 439 aaPredicted RBP20.93■□□□□ 0.94
MBD3-209ENST00000592012 MAIP1Q8WWC4 291 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 ZNF518BQ9C0D4 1074 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 CHST7Q9NS84 486 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.93■□□□□ 0.94
MBD3-209ENST00000592012 SIX4Q9UIU6 781 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 PCDHGC3Q9UN70 934 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 TCRBV5S1A1TA0A578 114 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 MEFVO15553 781 aaPredicted RBP20.93■□□□□ 0.94
MBD3-209ENST00000592012 SNAI1O95863 264 aaPredicted RBP20.93■□□□□ 0.94
MBD3-209ENST00000592012 CALB1P05937 261 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 ZNF286BP0CG31 522 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 MAN1A1P33908 653 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 GNGT1P63211 74 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 TTC19Q6DKK2 380 aaPredicted RBP20.93■□□□□ 0.94
MBD3-209ENST00000592012 SMYD5Q6GMV2 418 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 ZNF467Q7Z7K2 595 aaPredicted RBP20.93■□□□□ 0.94
MBD3-209ENST00000592012 KATNAL2Q8IYT4 538 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 TMEM35BQ8NCS4 154 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 CENPHQ9H3R5 247 aa20.93■□□□□ 0.94
MBD3-209ENST00000592012 CCL15-CCL14A0A0B4J2E2 113 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 TMEM191CA6NGB0 347 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 PPFIA4O75335 1185 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 STAG3L1P0CL83 205 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 EIF4BP23588 611 aaKnown RBP20.92■□□□□ 0.94
MBD3-209ENST00000592012 CDH5P33151 784 aaPredicted RBP20.92■□□□□ 0.94
MBD3-209ENST00000592012 PMS2P54278 862 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 MKRN3Q13064 507 aaKnown RBP20.92■□□□□ 0.94
MBD3-209ENST00000592012 KLF1Q13351 362 aaPredicted RBP20.92■□□□□ 0.94
MBD3-209ENST00000592012 CCL15Q16663 113 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 BRI3BPQ8WY22 251 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 ART4Q93070 314 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 PABPC3Q9H361 631 aaKnown RBP20.92■□□□□ 0.94
MBD3-209ENST00000592012 NXF1Q9UBU9 619 aaKnown RBP20.92■□□□□ 0.94
MBD3-209ENST00000592012 IP6K2Q9UHH9 426 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 POLIQ9UNA4 740 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 LACTBL1A8MY62 500 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 EIF3HO15372 352 aaKnown RBP eCLIP20.92■□□□□ 0.94
MBD3-209ENST00000592012 GTF2A2P52657 109 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 SNX1Q13596 522 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 C1orf127Q8N9H9 656 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 ATG4AQ8WYN0 398 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 PPP1R16BQ96T49 567 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 CWC15Q9P013 229 aaKnown RBP20.92■□□□□ 0.94
MBD3-209ENST00000592012 MORF4L1Q9UBU8 362 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 AKT3Q9Y243 479 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 USTQ9Y2C2 406 aa20.92■□□□□ 0.94
MBD3-209ENST00000592012 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.91■□□□□ 0.94
MBD3-209ENST00000592012 VTNP04004 478 aa20.91■□□□□ 0.94
MBD3-209ENST00000592012 NFICP08651 508 aa20.91■□□□□ 0.94
MBD3-209ENST00000592012 KRT19P08727 400 aa20.91■□□□□ 0.94
MBD3-209ENST00000592012 MCF2P10911 925 aa20.91■□□□□ 0.94
MBD3-209ENST00000592012 RALAP11233 206 aa20.91■□□□□ 0.94
MBD3-209ENST00000592012 PPP1R7Q15435 360 aa20.91■□□□□ 0.94
MBD3-209ENST00000592012 MAP1SQ66K74 1059 aaPredicted RBP20.91■□□□□ 0.94
MBD3-209ENST00000592012 PDZD7Q9H5P4 517 aa20.91■□□□□ 0.94
MBD3-209ENST00000592012 CLEC11AQ9Y240 323 aa20.91■□□□□ 0.94
MBD3-209ENST00000592012 IVNS1ABPQ9Y6Y0 642 aa20.91■□□□□ 0.94
MBD3-209ENST00000592012 GCLCP48506 637 aaPredicted RBP20.9■□□□□ 0.94
MBD3-209ENST00000592012 EIF3BP55884 814 aaKnown RBP20.9■□□□□ 0.94
MBD3-209ENST00000592012 CCDC50Q8IVM0 306 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 TMEM130Q8N3G9 435 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 EXD1Q8NHP7 514 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 CXorf38Q8TB03 319 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 HEMGNQ9BXL5 484 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 BCO2Q9BYV7 579 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 DCLK3Q9C098 648 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 LRRC4CQ9HCJ2 640 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 MTRF1LQ9UGC7 380 aaKnown RBP20.9■□□□□ 0.94
MBD3-209ENST00000592012 H3BRB1 525 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 TP73O15350 636 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 NUDT17P0C025 328 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 TMOD1P28289 359 aa20.9■□□□□ 0.94
MBD3-209ENST00000592012 TNFAIP2Q03169 654 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms