RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 TARSP26639 723 aaKnown RBP6.96□□□□□ -1.3
VPS4B-205ENST00000591383 CTNNB1P35222 781 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 SCNN1GP51170 649 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 YARSP54577 528 aaKnown RBP6.96□□□□□ -1.3
VPS4B-205ENST00000591383 RNASELQ05823 741 aaKnown RBP6.96□□□□□ -1.3
VPS4B-205ENST00000591383 PPP2R3AQ06190 1150 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 PWP1Q13610 501 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 BTG3Q14201 252 aaPredicted RBP6.96□□□□□ -1.3
VPS4B-205ENST00000591383 RAB30Q15771 203 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 BMT2Q1RMZ1 405 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 GLRA4Q5JXX5 417 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 CLLU1OSQ5K130 101 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 ZBTB41Q5SVQ8 909 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 ZNF658Q5TYW1 1059 aaPredicted RBP6.96□□□□□ -1.3
VPS4B-205ENST00000591383 RASIP1Q5U651 963 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 EPM2AIP1Q7L775 607 aaPredicted RBP6.96□□□□□ -1.3
VPS4B-205ENST00000591383 RTN4RL1Q86UN2 441 aaPredicted RBP6.96□□□□□ -1.3
VPS4B-205ENST00000591383 LRRC43Q8N309 656 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 SMG8Q8ND04 991 aaKnown RBP6.96□□□□□ -1.3
VPS4B-205ENST00000591383 SEC16BQ96JE7 1060 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 ZFP42Q96MM3 310 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 GSDMAQ96QA5 445 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 TSG101Q99816 390 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 CBWD1Q9BRT8 395 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 FAM213AQ9BRX8 229 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 OXCT2Q9BYC2 517 aaPredicted RBP6.96□□□□□ -1.3
VPS4B-205ENST00000591383 MRPL9Q9BYD2 267 aaKnown RBP6.96□□□□□ -1.3
VPS4B-205ENST00000591383 GSX2Q9BZM3 304 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 NKX2-4Q9H2Z4 354 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 PRO3102Q9H379 93 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 PCIF1Q9H4Z3 704 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 TMEM206Q9H813 350 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 AGPAT3Q9NRZ7 376 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 TOPORSQ9NS56 1045 aaPredicted RBP6.96□□□□□ -1.3
VPS4B-205ENST00000591383 SNTG2Q9NY99 539 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 MSRAQ9UJ68 235 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 AGO2Q9UKV8 859 aaKnown RBP6.96□□□□□ -1.3
VPS4B-205ENST00000591383 YBX2Q9Y2T7 364 aaKnown RBP6.96□□□□□ -1.3
VPS4B-205ENST00000591383 DYRK1BQ9Y463 629 aa6.96□□□□□ -1.3
VPS4B-205ENST00000591383 TMEM238LA0A1B0GVL6 79 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 ARL5CA6NH57 179 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 ABLIM1O14639 778 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 CLIC2O15247 247 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 OGTO15294 1046 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 ZC3H11AO75152 810 aaKnown RBP eCLIP6.95□□□□□ -1.3
VPS4B-205ENST00000591383 CLSTN1O94985 981 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 PROZP22891 400 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 GBP2P32456 591 aaPredicted RBP6.95□□□□□ -1.3
VPS4B-205ENST00000591383 HOXD13P35453 343 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 TNFSF9P41273 254 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 ACOT2P49753 483 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 MCL1Q07820 350 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 SFSWAPQ12872 951 aaKnown RBP6.95□□□□□ -1.3
VPS4B-205ENST00000591383 CCINQ13939 588 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 KNOP1Q1ED39 458 aaKnown RBP6.95□□□□□ -1.3
VPS4B-205ENST00000591383 NOMO2Q5JPE7 1267 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 CEP135Q66GS9 1140 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 SLFN12LQ6IEE8 588 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 ZNF662Q6ZS27 426 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 TMEM192Q8IY95 271 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 CMTR2Q8IYT2 770 aaKnown RBP6.95□□□□□ -1.3
VPS4B-205ENST00000591383 GUF1Q8N442 669 aaKnown RBP6.95□□□□□ -1.3
VPS4B-205ENST00000591383 FIBCD1Q8N539 461 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 GOLGA5Q8TBA6 731 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 PHOSPHO2Q8TCD6 241 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 TOP1MTQ969P6 601 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 TIFAQ96CG3 184 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 SNX27Q96L92 541 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 TMEM74Q96NL1 305 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 GAD1Q99259 594 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 RAD9AQ99638 391 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 NTPCRQ9BSD7 190 aaKnown RBP6.95□□□□□ -1.3
VPS4B-205ENST00000591383 STRA6Q9BX79 667 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 PBX4Q9BYU1 374 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 HAPLN2Q9GZV7 340 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 TMEM117Q9H0C3 514 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 ELAC1Q9H777 363 aaKnown RBP6.95□□□□□ -1.3
VPS4B-205ENST00000591383 ABCB6Q9NP58 842 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 TYW1Q9NV66 732 aaKnown RBP6.95□□□□□ -1.3
VPS4B-205ENST00000591383 RBAKQ9NYW8 714 aaPredicted RBP6.95□□□□□ -1.3
VPS4B-205ENST00000591383 HSPBP1Q9NZL4 362 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 PPM1HQ9ULR3 514 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 PCDHA11Q9Y5I1 949 aa6.95□□□□□ -1.3
VPS4B-205ENST00000591383 MRPL42Q9Y6G3 142 aaKnown RBP6.95□□□□□ -1.3
VPS4B-205ENST00000591383 PLXNA4Q9HCM2 1894 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 ATG2AQ2TAZ0 1938 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 A0A0B4J269 797 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 TRIM49BA6NDI0 452 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 CASTOR2A6NHX0 329 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 SOX1O00570 391 aaPredicted RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 CALUO43852 315 aaPredicted RBP6.94□□□□□ -1.3
VPS4B-205ENST00000591383 EXOC3O60645 756 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 DGKIO75912 1065 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 ARHGEF15O94989 841 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 EOMESO95936 686 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 NR3C1P04150 777 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 CLTAP09496 248 aa6.94□□□□□ -1.3
VPS4B-205ENST00000591383 GARTP22102 1010 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms