RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ACTR2P61160 394 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 HEATR6Q6AI08 1181 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 IDI2Q9BXS1 227 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 DCLK3Q9C098 648 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 DHX35Q9H5Z1 703 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 FAM198AQ9UFP1 575 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 PCDHAC2Q9Y5I4 1007 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 SCN11AQ9UI33 1791 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 PPFIA2O75334 1257 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 ZNF200P98182 395 aaPredicted RBP18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 MAP7Q14244 749 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 SPDYCQ5MJ68 293 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 DPP9Q86TI2 863 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 SUGP1Q8IWZ8 645 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 MCOLN2Q8IZK6 566 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 NUF2Q9BZD4 464 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 IKZF4Q9H2S9 585 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 RAB6BQ9NRW1 208 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 ZC3H11AO75152 810 aaKnown RBP eCLIP18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 DDR1Q08345 913 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 PPIL6Q8IXY8 311 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 FAM71DQ8N9W8 422 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 FIS1Q9Y3D6 152 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 DUOX1Q9NRD9 1551 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 M0R2N6 131 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 GIPC1O14908 333 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 CFLARO15519 480 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 ATP6V1G2O95670 118 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 CTCFP49711 727 aaPredicted RBP18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 ERFP50548 548 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 CDKL3Q8IVW4 592 aaPredicted RBP18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 ALKBH8Q96BT7 664 aaKnown RBP18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 NIF3L1Q9GZT8 377 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 FAM49AQ9H0Q0 323 aaPredicted RBP18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 NAALADL1Q9UQQ1 740 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 ENO1P06733 434 aaKnown RBP18■□□□□ 0.47
SMARCA4-215ENST00000590574 SNHG28P0DPA3 235 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 GARTP22102 1010 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 PGM1P36871 562 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 ZNF280CQ8ND82 737 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 SPATA18Q8TC71 538 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 DISP2A7MBM2 1401 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 TGFB1I1O43294 461 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 APRTP07741 180 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 PDGFRAP16234 1089 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 HOXA10P31260 410 aaPredicted RBP18■□□□□ 0.47
SMARCA4-215ENST00000590574 MARCKSL1P49006 195 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 CCNG2Q16589 344 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 MIPOL1Q8TD10 442 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 SYTL5Q8TDW5 730 aaPredicted RBP18■□□□□ 0.47
SMARCA4-215ENST00000590574 TTC1Q99614 292 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 WDR35Q9P2L0 1181 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 SRGAP2BP0DMP2 458 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 TM4SF1P30408 202 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 RPS6KA2Q15349 733 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 ZCWPW2Q504Y3 356 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 XRRA1Q6P2D8 792 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 YTHDF3Q7Z739 585 aaKnown RBP18■□□□□ 0.47
SMARCA4-215ENST00000590574 DTX3LQ8TDB6 740 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 MANSC1Q9H8J5 431 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 ZC3H7BQ9UGR2 993 aaKnown RBP18■□□□□ 0.47
SMARCA4-215ENST00000590574 CASQ2O14958 399 aaPredicted RBP18■□□□□ 0.47
SMARCA4-215ENST00000590574 HNRNPCL1O60812 293 aaKnown RBP18■□□□□ 0.47
SMARCA4-215ENST00000590574 SHOX2O60902 331 aaPredicted RBP18■□□□□ 0.47
SMARCA4-215ENST00000590574 GPC4O75487 556 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 OATP04181 439 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 ALDH18A1P54886 795 aaKnown RBP18■□□□□ 0.47
SMARCA4-215ENST00000590574 KDSRQ06136 332 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 DBN1Q16643 649 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 BMT2Q1RMZ1 405 aa18■□□□□ 0.47
SMARCA4-215ENST00000590574 METTL5Q9NRN9 209 aaKnown RBP18■□□□□ 0.47
SMARCA4-215ENST00000590574 SPATA31A6Q5VVP1 1343 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 CCDC22O60826 627 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 EPHB1P54762 984 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 OVGP1Q12889 678 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 CERKQ8TCT0 537 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 KLHL8Q9P2G9 620 aaPredicted RBP17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 SUFUQ9UMX1 484 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 O00370 1275 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 MRPS9P82933 396 aaKnown RBP17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 EPS8L1Q8TE68 723 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 RANBP17Q9H2T7 1088 aaKnown RBP17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 HAO1Q9UJM8 370 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 NOD1Q9Y239 953 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 GRAP2O75791 330 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 RGS7P49802 495 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 GRAMD1BQ3KR37 738 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 CATSPER4Q7RTX7 472 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 CHST7Q9NS84 486 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 CREB3O43889 395 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 RFC5P40937 340 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 SHROOM1Q2M3G4 852 aaPredicted RBP17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 EXD1Q8NHP7 514 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 WWP1Q9H0M0 922 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 PXMP2Q9NR77 195 aa17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 MARCOQ9UEW3 520 aaPredicted RBP17.99■□□□□ 0.47
SMARCA4-215ENST00000590574 ANKRD63C9JTQ0 380 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 GSTA2P09210 222 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 ADORA2BP29275 332 aa17.98■□□□□ 0.47
SMARCA4-215ENST00000590574 CCNA1P78396 465 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms