RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 PSMD5Q16401 504 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 EML3Q32P44 896 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 RTP2Q5QGT7 225 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 JADE1Q6IE81 842 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 CES5AQ6NT32 575 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 PRSS55Q6UWB4 352 aaPredicted RBP11.24□□□□□ -0.61
SDF2-208ENST00000589788 GLYCTKQ8IVS8 523 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 C3orf58Q8NDZ4 430 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 GLIS3Q8NEA6 775 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 BEST2Q8NFU1 509 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 CCDC47Q96A33 483 aaKnown RBP11.24□□□□□ -0.61
SDF2-208ENST00000589788 SAAL1Q96ER3 474 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 FBXL18Q96ME1 805 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 FAM213AQ9BRX8 229 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 ASB7Q9H672 318 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 RXFP1Q9HBX9 757 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 SLC39A2Q9NP94 309 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 FNIP2Q9P278 1114 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 DPP7Q9UHL4 492 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 USP15Q9Y4E8 981 aaPredicted RBP11.24□□□□□ -0.61
SDF2-208ENST00000589788 ANK1P16157 1881 aa11.24□□□□□ -0.61
SDF2-208ENST00000589788 UBE4BO95155 1302 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 GOLGA6L22H0YM25 854 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 I3L4J1 428 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 ZNF202O95125 648 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 ADRB2P07550 413 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 NFICP08651 508 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 RPL17P18621 184 aaKnown RBP11.23□□□□□ -0.61
SDF2-208ENST00000589788 FGFR3P22607 806 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 BRCC3P46736 316 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 CLCN4P51793 760 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 ITIH3Q06033 890 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 EHHADHQ08426 723 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 PSMD2Q13200 908 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 MMRN1Q13201 1228 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 ZBTB6Q15916 424 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 RARS2Q5T160 578 aaKnown RBP11.23□□□□□ -0.61
SDF2-208ENST00000589788 SYCE2Q6PIF2 218 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 KRBA2Q6ZNG9 492 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 LIAT1Q6ZQX7 453 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 ANKS3Q6ZW76 656 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 EPM2AIP1Q7L775 607 aaPredicted RBP11.23□□□□□ -0.61
SDF2-208ENST00000589788 PALB2Q86YC2 1186 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 NELFCDQ8IXH7 590 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 ZNF507Q8TCN5 953 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 PIK3R5Q8WYR1 880 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 CBWD1Q9BRT8 395 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 GOLPH3LQ9H4A5 285 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 PCIF1Q9H4Z3 704 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 SFXN1Q9H9B4 322 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 PRKAG3Q9UGI9 489 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 DERAQ9Y315 318 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 C2CD2Q9Y426 696 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 MAP4K5Q9Y4K4 846 aa11.23□□□□□ -0.61
SDF2-208ENST00000589788 VWA8A3KMH1 1905 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 PLXNA3P51805 1871 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 GOLGA8IPA6NC78 632 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 GOLGA8JA6NMD2 632 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 TNFRSF10AO00220 468 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 EXTL3O43909 919 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 DKK1O94907 266 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 RPN1P04843 607 aaKnown RBP11.22□□□□□ -0.61
SDF2-208ENST00000589788 IGFBP6P24592 240 aaPredicted RBP11.22□□□□□ -0.61
SDF2-208ENST00000589788 VARSP26640 1264 aaKnown RBP11.22□□□□□ -0.61
SDF2-208ENST00000589788 TKTP29401 623 aaKnown RBP11.22□□□□□ -0.61
SDF2-208ENST00000589788 LRPAP1P30533 357 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 CBX2Q14781 532 aaPredicted RBP11.22□□□□□ -0.61
SDF2-208ENST00000589788 SPATA1Q5VX52 437 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 KANK3Q6NY19 840 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 CD300LGQ6UXG3 332 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 CRELD2Q6UXH1 353 aaPredicted RBP11.22□□□□□ -0.61
SDF2-208ENST00000589788 HS2ST1Q7LGA3 356 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 ADHFE1Q8IWW8 467 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 GPD1LQ8N335 351 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 C12orf76Q8N812 135 aaPredicted RBP11.22□□□□□ -0.61
SDF2-208ENST00000589788 LNX1Q8TBB1 728 aaPredicted RBP11.22□□□□□ -0.61
SDF2-208ENST00000589788 SCFD1Q8WVM8 642 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 RIPOR3Q96MK2 946 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 POP1Q99575 1024 aaKnown RBP11.22□□□□□ -0.61
SDF2-208ENST00000589788 S1PR5Q9H228 398 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 ADAM7Q9H2U9 754 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 MAN1C1Q9NR34 630 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 RBAKQ9NYW8 714 aaPredicted RBP11.22□□□□□ -0.61
SDF2-208ENST00000589788 CDV3Q9UKY7 258 aaKnown RBP11.22□□□□□ -0.61
SDF2-208ENST00000589788 CUL9Q8IWT3 2517 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 TTC28Q96AY4 2481 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 NCOR1O75376 2440 aa11.22□□□□□ -0.61
SDF2-208ENST00000589788 ZNF233A6NK53 670 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 SYN3O14994 580 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 KLRC4O43908 158 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 C1RP00736 705 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 SPATA31D3P0C874 917 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 HOXD13P35453 343 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 MTHFRP42898 656 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 GUCY2FP51841 1108 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 SNRPFP62306 86 aaKnown RBP11.21□□□□□ -0.61
SDF2-208ENST00000589788 TFAMQ00059 246 aaKnown RBP11.21□□□□□ -0.61
SDF2-208ENST00000589788 ZP2Q05996 745 aa11.21□□□□□ -0.61
SDF2-208ENST00000589788 KNOP1Q1ED39 458 aaKnown RBP11.21□□□□□ -0.61
SDF2-208ENST00000589788 BMT2Q1RMZ1 405 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms