RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 PDGFBP01127 241 aaPredicted RBP16.43■□□□□ 0.22
ERCC1-209ENST00000589214 MYL1P05976 194 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 LAMP2P13473 410 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 TYMPP19971 482 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 TAF6P49848 677 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 CYP2J2P51589 502 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 ADCY1Q08828 1119 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 PSMD2Q13200 908 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 TDGQ13569 410 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 PABPC1LQ4VXU2 614 aaKnown RBP16.43■□□□□ 0.22
ERCC1-209ENST00000589214 TPGS2Q68CL5 300 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 OVOS1Q6IE37 1185 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 RNF19BQ6ZMZ0 732 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 NT5DC4Q86YG4 428 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 FBXL6Q8N531 539 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 RDH13Q8NBN7 331 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 ITFG1Q8TB96 612 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 PGLYRP2Q96PD5 576 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 AGPAT3Q9NRZ7 376 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 IGSF9Q9P2J2 1179 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 DNMT3BQ9UBC3 853 aaKnown RBP16.43■□□□□ 0.22
ERCC1-209ENST00000589214 AFF4Q9UHB7 1163 aaKnown RBP16.43■□□□□ 0.22
ERCC1-209ENST00000589214 MAPK8IP1Q9UQF2 711 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 UBE4BO95155 1302 aa16.43■□□□□ 0.22
ERCC1-209ENST00000589214 ARHGEF37A1IGU5 675 aa16.42■□□□□ 0.22
ERCC1-209ENST00000589214 KNOP1Q1ED39 458 aaKnown RBP16.42■□□□□ 0.22
ERCC1-209ENST00000589214 BMT2Q1RMZ1 405 aa16.42■□□□□ 0.22
ERCC1-209ENST00000589214 RTL10Q7L3V2 364 aa16.42■□□□□ 0.22
ERCC1-209ENST00000589214 CBWD2Q8IUF1 395 aa16.42■□□□□ 0.22
ERCC1-209ENST00000589214 TCEAL8Q8IYN2 117 aa16.42■□□□□ 0.22
ERCC1-209ENST00000589214 ING5Q8WYH8 240 aa16.42■□□□□ 0.22
ERCC1-209ENST00000589214 ZNF560Q96MR9 790 aa16.42■□□□□ 0.22
ERCC1-209ENST00000589214 PDE11AQ9HCR9 933 aa16.42■□□□□ 0.22
ERCC1-209ENST00000589214 CDH7Q9ULB5 785 aa16.42■□□□□ 0.22
ERCC1-209ENST00000589214 DUSP12Q9UNI6 340 aa16.42■□□□□ 0.22
ERCC1-209ENST00000589214 OR6C75A6NL08 312 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 NARSO43776 548 aaKnown RBP16.41■□□□□ 0.22
ERCC1-209ENST00000589214 RHOBTB3O94955 611 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 ITGB3P05106 788 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 RHOP08100 348 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 PAX3P23760 479 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 POLR2BP30876 1174 aaKnown RBP16.41■□□□□ 0.22
ERCC1-209ENST00000589214 SLC5A9Q2M3M2 681 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 SV2CQ496J9 727 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 LMBRD2Q68DH5 695 aaPredicted RBP16.41■□□□□ 0.22
ERCC1-209ENST00000589214 SCARA3Q6AZY7 606 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 HS2ST1Q7LGA3 356 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 NPAS3Q8IXF0 933 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 C1orf127Q8N9H9 656 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 FGF13Q92913 245 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 CCDC47Q96A33 483 aaKnown RBP16.41■□□□□ 0.22
ERCC1-209ENST00000589214 TMEM209Q96SK2 561 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 OXCT2Q9BYC2 517 aaPredicted RBP16.41■□□□□ 0.22
ERCC1-209ENST00000589214 MTMR12Q9C0I1 747 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 MRPS23Q9Y3D9 190 aaKnown RBP16.41■□□□□ 0.22
ERCC1-209ENST00000589214 YIPF1Q9Y548 306 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 NUMBLQ9Y6R0 609 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 NOTCH4Q99466 2003 aa16.41■□□□□ 0.22
ERCC1-209ENST00000589214 ZNF233A6NK53 670 aa16.4■□□□□ 0.22
ERCC1-209ENST00000589214 CYB561D2O14569 222 aa16.4■□□□□ 0.22
ERCC1-209ENST00000589214 KIAA0391O15091 583 aaKnown RBP16.4■□□□□ 0.22
ERCC1-209ENST00000589214 PRPF40AO75400 957 aaKnown RBP16.4■□□□□ 0.22
ERCC1-209ENST00000589214 VNN2O95498 520 aa16.4■□□□□ 0.22
ERCC1-209ENST00000589214 TMEM191BP0C7N4 346 aa16.4■□□□□ 0.22
ERCC1-209ENST00000589214 VCPP55072 806 aaKnown RBP16.4■□□□□ 0.22
ERCC1-209ENST00000589214 TWF1Q12792 350 aa16.4■□□□□ 0.22
ERCC1-209ENST00000589214 HTR4Q13639 388 aa16.4■□□□□ 0.22
ERCC1-209ENST00000589214 SMYD4Q8IYR2 804 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-209ENST00000589214 OR10T2Q8NGX3 314 aa16.4■□□□□ 0.22
ERCC1-209ENST00000589214 CORO1BQ9BR76 489 aa16.4■□□□□ 0.22
ERCC1-209ENST00000589214 FBXL21Q9UKT6 434 aa16.4■□□□□ 0.22
ERCC1-209ENST00000589214 DSEQ9UL01 958 aa16.4■□□□□ 0.22
ERCC1-209ENST00000589214 AGAP1Q9UPQ3 857 aa16.4■□□□□ 0.22
ERCC1-209ENST00000589214 ZFP37Q9Y6Q3 630 aaPredicted RBP16.4■□□□□ 0.22
ERCC1-209ENST00000589214 PTPRJQ12913 1337 aa16.4■□□□□ 0.22
ERCC1-209ENST00000589214 MTMR11A4FU01 709 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 KPNA7A9QM74 516 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 ANHXE9PGG2 379 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 CYP11A1P05108 521 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 CFHP08603 1231 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 KRT19P08727 400 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 CEBPBP17676 345 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 PTPN2P17706 415 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 PNPLA4P41247 253 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 CDR1P51861 262 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 BFSP1Q12934 665 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 MYBPC2Q14324 1141 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 KCNB1Q14721 858 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 WSCD1Q658N2 575 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 METTL23Q86XA0 190 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 ELMOD1Q8N336 334 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 SLC44A3Q8N4M1 653 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 TTC9BQ8N6N2 239 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 XXYLT1Q8NBI6 393 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 CACTINQ8WUQ7 758 aaKnown RBP16.39■□□□□ 0.21
ERCC1-209ENST00000589214 CCDC34Q96HJ3 373 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 CRISPLD1Q9H336 500 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 KCTD10Q9H3F6 313 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 MFSD1Q9H3U5 465 aa16.39■□□□□ 0.21
ERCC1-209ENST00000589214 ITGA11Q9UKX5 1188 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms