RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 THEGQ9P2T0 379 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 SIX4Q9UIU6 781 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 TRAF3IP3Q9Y228 551 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 DERAQ9Y315 318 aa18.93■□□□□ 0.62
DNMT1-215ENST00000588913 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.93■□□□□ 0.62
DNMT1-215ENST00000588913 CARNS1A5YM72 827 aa18.92■□□□□ 0.62
DNMT1-215ENST00000588913 TRIM49BA6NDI0 452 aa18.92■□□□□ 0.62
DNMT1-215ENST00000588913 ZNF233A6NK53 670 aa18.92■□□□□ 0.62
DNMT1-215ENST00000588913 AARSP49588 968 aaKnown RBP eCLIP18.92■□□□□ 0.62
DNMT1-215ENST00000588913 MORC3Q14149 939 aa18.92■□□□□ 0.62
DNMT1-215ENST00000588913 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.92■□□□□ 0.62
DNMT1-215ENST00000588913 CCDC47Q96A33 483 aaKnown RBP18.92■□□□□ 0.62
DNMT1-215ENST00000588913 BORCS6Q96GS4 357 aa18.92■□□□□ 0.62
DNMT1-215ENST00000588913 MSLNLQ96KJ4 702 aa18.92■□□□□ 0.62
DNMT1-215ENST00000588913 TTPALQ9BTX7 342 aa18.92■□□□□ 0.62
DNMT1-215ENST00000588913 MRPL17Q9NRX2 175 aaKnown RBP18.92■□□□□ 0.62
DNMT1-215ENST00000588913 TIMM13Q9Y5L4 95 aaPredicted RBP18.92■□□□□ 0.62
DNMT1-215ENST00000588913 SNRPFP62306 86 aaKnown RBP18.91■□□□□ 0.62
DNMT1-215ENST00000588913 DLG4P78352 724 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 C1orf220Q5T0J3 134 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 SLC9A9Q8IVB4 645 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 ADSSL1Q8N142 457 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 BEST2Q8NFU1 509 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 ENOX1Q8TC92 643 aaKnown RBP18.91■□□□□ 0.62
DNMT1-215ENST00000588913 CCDC127Q96BQ5 260 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 MFSD14AQ96MC6 490 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 CLSTN3Q9BQT9 956 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 MUC3AQ02505 3323 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 PPP1R3GB7ZBB8 358 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 KIAA0391O15091 583 aaKnown RBP18.91■□□□□ 0.62
DNMT1-215ENST00000588913 STX10O60499 249 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 EXOC3O60645 756 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 LILRA4P59901 499 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 TUBB4BP68371 445 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 PSMD6Q15008 389 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 SYCE2Q6PIF2 218 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 PIK3R5Q8WYR1 880 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 SUSD3Q96L08 255 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 APOL5Q9BWW9 433 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 INTS13Q9NVM9 706 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 RMND1Q9NWS8 449 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 DNAI1Q9UI46 699 aa18.91■□□□□ 0.62
DNMT1-215ENST00000588913 AKAP3O75969 853 aa18.9■□□□□ 0.62
DNMT1-215ENST00000588913 ITGB3P05106 788 aa18.9■□□□□ 0.62
DNMT1-215ENST00000588913 SPATA31D3P0C874 917 aa18.9■□□□□ 0.62
DNMT1-215ENST00000588913 H2AFXP16104 143 aaPredicted RBP18.9■□□□□ 0.62
DNMT1-215ENST00000588913 ERCC5P28715 1186 aaPredicted RBP18.9■□□□□ 0.62
DNMT1-215ENST00000588913 POLR2BP30876 1174 aaKnown RBP18.9■□□□□ 0.62
DNMT1-215ENST00000588913 CLCN4P51793 760 aa18.9■□□□□ 0.62
DNMT1-215ENST00000588913 PSMD5Q16401 504 aa18.9■□□□□ 0.62
DNMT1-215ENST00000588913 COBLL1Q53SF7 1204 aa18.9■□□□□ 0.62
DNMT1-215ENST00000588913 SYT10Q6XYQ8 523 aa18.9■□□□□ 0.62
DNMT1-215ENST00000588913 SPATA31D4Q6ZUB0 917 aa18.9■□□□□ 0.62
DNMT1-215ENST00000588913 C12orf76Q8N812 135 aaPredicted RBP18.9■□□□□ 0.62
DNMT1-215ENST00000588913 TMEM174Q8WUU8 243 aa18.9■□□□□ 0.62
DNMT1-215ENST00000588913 ELMO3Q96BJ8 720 aa18.9■□□□□ 0.62
DNMT1-215ENST00000588913 HSD3B7Q9H2F3 369 aa18.9■□□□□ 0.62
DNMT1-215ENST00000588913 NUB1Q9Y5A7 615 aa18.9■□□□□ 0.62
DNMT1-215ENST00000588913 MTCL1Q9Y4B5 1905 aaKnown RBP18.89■□□□□ 0.61
DNMT1-215ENST00000588913 GRXCR2A6NFK2 248 aa18.89■□□□□ 0.61
DNMT1-215ENST00000588913 DLATP10515 647 aaKnown RBP18.89■□□□□ 0.61
DNMT1-215ENST00000588913 ELF2Q15723 593 aa18.89■□□□□ 0.61
DNMT1-215ENST00000588913 VARS2Q5ST30 1063 aaKnown RBP18.89■□□□□ 0.61
DNMT1-215ENST00000588913 ANKRD40Q6AI12 368 aa18.89■□□□□ 0.61
DNMT1-215ENST00000588913 CENPPQ6IPU0 288 aa18.89■□□□□ 0.61
DNMT1-215ENST00000588913 KIAA1841Q6NSI8 718 aa18.89■□□□□ 0.61
DNMT1-215ENST00000588913 PALB2Q86YC2 1186 aa18.89■□□□□ 0.61
DNMT1-215ENST00000588913 TSPAN18Q96SJ8 248 aa18.89■□□□□ 0.61
DNMT1-215ENST00000588913 COG5Q9UP83 839 aa18.89■□□□□ 0.61
DNMT1-215ENST00000588913 C2orf16Q68DN1 1984 aa18.89■□□□□ 0.61
DNMT1-215ENST00000588913 LRRIQ3A6PVS8 624 aaPredicted RBP18.88■□□□□ 0.61
DNMT1-215ENST00000588913 EFCAB8A8MWE9 144 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 M0QZQ0 153 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 TBC1D4O60343 1298 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 NR2F2P24468 414 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 NDUFV1P49821 464 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 MRPL58Q14197 206 aaKnown RBP18.88■□□□□ 0.61
DNMT1-215ENST00000588913 TMEM184AQ6ZMB5 413 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 GOLGA5Q8TBA6 731 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 UBXN4Q92575 508 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 MED15Q96RN5 788 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 CGRRF1Q99675 332 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 KIAA1586Q9HCI6 787 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 AGAP1Q9UPQ3 857 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 KLRC2P26717 231 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 TUBB2AQ13885 445 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 NFIL3Q16649 462 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 FBXO38Q6PIJ6 1188 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 MNS1Q8NEH6 495 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 PARD3BQ8TEW8 1205 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 CDCA3Q99618 268 aaPredicted RBP18.88■□□□□ 0.61
DNMT1-215ENST00000588913 TUBB2BQ9BVA1 445 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 MTRRQ9UBK8 725 aa18.88■□□□□ 0.61
DNMT1-215ENST00000588913 XPOTO43592 962 aaKnown RBP18.87■□□□□ 0.61
DNMT1-215ENST00000588913 CALUO43852 315 aaPredicted RBP18.87■□□□□ 0.61
DNMT1-215ENST00000588913 CST3P01034 146 aaPredicted RBP18.87■□□□□ 0.61
DNMT1-215ENST00000588913 BMP1P13497 986 aa18.87■□□□□ 0.61
DNMT1-215ENST00000588913 IL9P15248 144 aa18.87■□□□□ 0.61
DNMT1-215ENST00000588913 ELAVL2Q12926 359 aaKnown RBP18.87■□□□□ 0.61
DNMT1-215ENST00000588913 TBX2Q13207 712 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms