RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 ACO2Q99798 780 aaKnown RBP23.78■■□□□ 1.4
CAPNS1-205ENST00000588780 POLR3CQ9BUI4 534 aaPredicted RBP23.78■■□□□ 1.4
CAPNS1-205ENST00000588780 MRPL4Q9BYD3 311 aaKnown RBP23.78■■□□□ 1.4
CAPNS1-205ENST00000588780 TPCN1Q9ULQ1 816 aa23.78■■□□□ 1.4
CAPNS1-205ENST00000588780 SLC27A5Q9Y2P5 690 aa23.78■■□□□ 1.4
CAPNS1-205ENST00000588780 ZFYVE26Q68DK2 2539 aa23.78■■□□□ 1.4
CAPNS1-205ENST00000588780 AKAP3O75969 853 aa23.77■■□□□ 1.4
CAPNS1-205ENST00000588780 GABRR2P28476 465 aa23.77■■□□□ 1.4
CAPNS1-205ENST00000588780 TNFRSF25Q93038 417 aa23.77■■□□□ 1.4
CAPNS1-205ENST00000588780 LRRC3Q9BY71 257 aa23.77■■□□□ 1.4
CAPNS1-205ENST00000588780 TMEM60Q9H2L4 133 aa23.77■■□□□ 1.4
CAPNS1-205ENST00000588780 IGF2RP11717 2491 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 BTBD18B2RXH4 712 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 WNT7AO00755 349 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 RHOBTB1O94844 696 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 FGF19O95750 216 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 PLK5Q496M5 336 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 SH3PXD2AQ5TCZ1 1133 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 KDF1Q8NAX2 398 aaPredicted RBP23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 ZC3H10Q96K80 434 aaKnown RBP23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 GCNAQ96QF7 691 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 HHIPQ96QV1 700 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 TARS2Q9BW92 718 aaKnown RBP23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 ADAM33Q9BZ11 813 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 DNAJC25Q9H1X3 360 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 OBP2AQ9NY56 170 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 CNTN3Q9P232 1028 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 PHLPP2Q6ZVD8 1323 aa23.76■■□□□ 1.39
CAPNS1-205ENST00000588780 CAVIN2O95810 425 aa23.75■■□□□ 1.39
CAPNS1-205ENST00000588780 MCF2P10911 925 aa23.75■■□□□ 1.39
CAPNS1-205ENST00000588780 RPA1P27694 616 aa23.75■■□□□ 1.39
CAPNS1-205ENST00000588780 GBP1P32455 592 aa23.75■■□□□ 1.39
CAPNS1-205ENST00000588780 PEX3P56589 373 aa23.75■■□□□ 1.39
CAPNS1-205ENST00000588780 TRIM29Q14134 588 aa23.75■■□□□ 1.39
CAPNS1-205ENST00000588780 GAREM2Q75VX8 874 aa23.75■■□□□ 1.39
CAPNS1-205ENST00000588780 CENPQQ7L2Z9 268 aaPredicted RBP23.75■■□□□ 1.39
CAPNS1-205ENST00000588780 DNAJB7Q7Z6W7 309 aaPredicted RBP23.75■■□□□ 1.39
CAPNS1-205ENST00000588780 ITIH5Q86UX2 942 aa23.75■■□□□ 1.39
CAPNS1-205ENST00000588780 BHMT2Q9H2M3 363 aa23.75■■□□□ 1.39
CAPNS1-205ENST00000588780 ASB3Q9Y575 518 aa23.75■■□□□ 1.39
CAPNS1-205ENST00000588780 TMEM8BA6NDV4 472 aa23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 PRAMEF12O95522 483 aa23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 MCM2P49736 904 aa23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 TAF12Q16514 161 aa23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 DSTYKQ6XUX3 929 aa23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 DIS3L2Q8IYB7 885 aaKnown RBP23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 CAMKK1Q8N5S9 505 aa23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 BEST2Q8NFU1 509 aa23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 OXCT2Q9BYC2 517 aaPredicted RBP23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 TM6SF1Q9BZW5 370 aa23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 SMG9Q9H0W8 520 aaKnown RBP23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 CRISPLD1Q9H336 500 aa23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 GKN1Q9NS71 199 aa23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 POLR3BQ9NW08 1133 aaPredicted RBP23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 TUBGCP4Q9UGJ1 667 aa23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 FASNP49327 2511 aaKnown RBP23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 ATG2BQ96BY7 2078 aa23.74■■□□□ 1.39
CAPNS1-205ENST00000588780 OR6C75A6NL08 312 aa23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 PFKFB2O60825 505 aa23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 RNF40O75150 1001 aa23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 SOAT2O75908 522 aa23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 CYP4F8P98187 520 aa23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 CACNB1Q02641 598 aaPredicted RBP23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 FSTL4Q6MZW2 842 aa23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 MPZL3Q6UWV2 235 aa23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 ATAD1Q8NBU5 361 aa23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 MKNK1Q9BUB5 465 aa23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 DUSP15Q9H1R2 295 aaPredicted RBP23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 TASP1Q9H6P5 420 aa23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 PTPRHQ9HD43 1115 aa23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 ANKFY1Q9P2R3 1169 aa23.73■■□□□ 1.39
CAPNS1-205ENST00000588780 DCLK1O15075 740 aa23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 OAZ2O95190 189 aa23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 VNN2O95498 520 aa23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 CCT6AP40227 531 aaKnown RBP23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 MATR3P43243 847 aaKnown RBP eCLIP23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 NPTX2P47972 431 aa23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 GPR17Q13304 367 aa23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 DMP1Q13316 513 aaPredicted RBP23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 VEPH1Q14D04 833 aa23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 KARSQ15046 597 aaKnown RBP23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 SEZ6Q53EL9 994 aa23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 TMEM196Q5HYL7 178 aa23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 HAUS3Q68CZ6 603 aa23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 ARMCX5Q6P1M9 558 aa23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 PSMG2Q969U7 264 aa23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 KMT5AQ9NQR1 393 aa23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 KIF26AQ9ULI4 1882 aaPredicted RBP23.72■■□□□ 1.39
CAPNS1-205ENST00000588780 CITO14578 2027 aa23.71■■□□□ 1.39
CAPNS1-205ENST00000588780 CTDNEP1O95476 244 aa23.71■■□□□ 1.39
CAPNS1-205ENST00000588780 TOP3BO95985 862 aaKnown RBP23.71■■□□□ 1.39
CAPNS1-205ENST00000588780 AMPD2Q01433 879 aa23.71■■□□□ 1.39
CAPNS1-205ENST00000588780 SPAG1Q07617 926 aa23.71■■□□□ 1.39
CAPNS1-205ENST00000588780 UAP1L1Q3KQV9 507 aa23.71■■□□□ 1.39
CAPNS1-205ENST00000588780 CENPPQ6IPU0 288 aa23.71■■□□□ 1.39
CAPNS1-205ENST00000588780 ZCCHC14Q8WYQ9 949 aaKnown RBP23.71■■□□□ 1.39
CAPNS1-205ENST00000588780 SEPT5Q99719 369 aaPredicted RBP23.71■■□□□ 1.39
CAPNS1-205ENST00000588780 SCNM1Q9BWG6 230 aa23.71■■□□□ 1.39
CAPNS1-205ENST00000588780 EBF3Q9H4W6 596 aa23.71■■□□□ 1.39
CAPNS1-205ENST00000588780 TMEM134Q9H6X4 195 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms