RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 BFSP1Q12934 665 aa21.68■■□□□ 1.06
ATG4D-208ENST00000588667 SV2CQ496J9 727 aa21.68■■□□□ 1.06
ATG4D-208ENST00000588667 TRAPPC11Q7Z392 1133 aa21.68■■□□□ 1.06
ATG4D-208ENST00000588667 PABPC5Q96DU9 382 aaKnown RBP21.68■■□□□ 1.06
ATG4D-208ENST00000588667 NAP1L5Q96NT1 182 aaPredicted RBP21.68■■□□□ 1.06
ATG4D-208ENST00000588667 KLHL5Q96PQ7 755 aa21.68■■□□□ 1.06
ATG4D-208ENST00000588667 FNIP2Q9P278 1114 aa21.68■■□□□ 1.06
ATG4D-208ENST00000588667 AGAP1Q9UPQ3 857 aa21.68■■□□□ 1.06
ATG4D-208ENST00000588667 XIRP2A4UGR9 3374 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 A0A1B0GTH6 734 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 SPTLC1O15269 473 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 CLASP2O75122 1294 aaKnown RBP21.67■■□□□ 1.06
ATG4D-208ENST00000588667 KRT19P08727 400 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 VAMP7P51809 220 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 KRT31Q15323 416 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 PSMD5Q16401 504 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 CTC1Q2NKJ3 1217 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 PRSS55Q6UWB4 352 aaPredicted RBP21.67■■□□□ 1.06
ATG4D-208ENST00000588667 DSTYKQ6XUX3 929 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 ANKS3Q6ZW76 656 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 APTXQ7Z2E3 356 aaKnown RBP21.67■■□□□ 1.06
ATG4D-208ENST00000588667 IRF2BP1Q8IU81 584 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 CREBRFQ8IUR6 639 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 APPL2Q8NEU8 664 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 LNX1Q8TBB1 728 aaPredicted RBP21.67■■□□□ 1.06
ATG4D-208ENST00000588667 ZNF516Q92618 1163 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 CEP63Q96MT8 703 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 R3HCC1Q9Y3T6 440 aaKnown RBP21.67■■□□□ 1.06
ATG4D-208ENST00000588667 PLXNA3P51805 1871 aa21.67■■□□□ 1.06
ATG4D-208ENST00000588667 ARHGEF37A1IGU5 675 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 TEX28O15482 410 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 ADH1AP07327 375 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 TPM2P07951 284 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 DLG4P78352 724 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 VARS2Q5ST30 1063 aaKnown RBP21.66■■□□□ 1.06
ATG4D-208ENST00000588667 PPFIBP1Q86W92 1011 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 BORCS6Q96GS4 357 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 SENP8Q96LD8 212 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 CLDND1Q9NY35 253 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 COG5Q9UP83 839 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 ODC1P11926 461 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 KLRC2P26717 231 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 NDUFV1P49821 464 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 MCCD1P59942 119 aaPredicted RBP21.66■■□□□ 1.06
ATG4D-208ENST00000588667 ADAM15Q13444 863 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 KCNC3Q14003 757 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 HLA-CQ95604 372 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 CNOT6LQ96LI5 555 aaKnown RBP21.66■■□□□ 1.06
ATG4D-208ENST00000588667 UBE2ZQ9H832 354 aaPredicted RBP21.66■■□□□ 1.06
ATG4D-208ENST00000588667 IMPACTQ9P2X3 320 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 MTRRQ9UBK8 725 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 BACE2Q9Y5Z0 518 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 HCFC2Q9Y5Z7 792 aa21.66■■□□□ 1.06
ATG4D-208ENST00000588667 MTCL1Q9Y4B5 1905 aaKnown RBP21.66■■□□□ 1.06
ATG4D-208ENST00000588667 KPNA7A9QM74 516 aa21.65■■□□□ 1.06
ATG4D-208ENST00000588667 LINC01565O15544 149 aa21.65■■□□□ 1.06
ATG4D-208ENST00000588667 GLP2RO95838 553 aa21.65■■□□□ 1.06
ATG4D-208ENST00000588667 SRGAP2BP0DMP2 458 aa21.65■■□□□ 1.06
ATG4D-208ENST00000588667 TYMPP19971 482 aa21.65■■□□□ 1.06
ATG4D-208ENST00000588667 COPB1P53618 953 aaKnown RBP21.65■■□□□ 1.06
ATG4D-208ENST00000588667 MYO1EQ12965 1108 aa21.65■■□□□ 1.06
ATG4D-208ENST00000588667 NR1I3Q14994 352 aa21.65■■□□□ 1.06
ATG4D-208ENST00000588667 C1orf220Q5T0J3 134 aa21.65■■□□□ 1.06
ATG4D-208ENST00000588667 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.64■■□□□ 1.05
ATG4D-208ENST00000588667 H7C4K7 107 aa21.64■■□□□ 1.05
ATG4D-208ENST00000588667 GNA14O95837 355 aa21.64■■□□□ 1.05
ATG4D-208ENST00000588667 RPL17P18621 184 aaKnown RBP21.64■■□□□ 1.05
ATG4D-208ENST00000588667 YWHAHQ04917 246 aaPredicted RBP21.64■■□□□ 1.05
ATG4D-208ENST00000588667 BIRC3Q13489 604 aa21.64■■□□□ 1.05
ATG4D-208ENST00000588667 MRPL58Q14197 206 aaKnown RBP21.64■■□□□ 1.05
ATG4D-208ENST00000588667 TDRD10Q5VZ19 366 aaKnown RBP21.64■■□□□ 1.05
ATG4D-208ENST00000588667 SCARA3Q6AZY7 606 aa21.64■■□□□ 1.05
ATG4D-208ENST00000588667 TMEM184AQ6ZMB5 413 aa21.64■■□□□ 1.05
ATG4D-208ENST00000588667 FILIP1Q7Z7B0 1213 aa21.64■■□□□ 1.05
ATG4D-208ENST00000588667 VN1R2Q8NFZ6 395 aa21.64■■□□□ 1.05
ATG4D-208ENST00000588667 HPDLQ96IR7 371 aa21.64■■□□□ 1.05
ATG4D-208ENST00000588667 RTN4Q9NQC3 1192 aaKnown RBP21.64■■□□□ 1.05
ATG4D-208ENST00000588667 TAB2Q9NYJ8 693 aa21.64■■□□□ 1.05
ATG4D-208ENST00000588667 PHACTR2O75167 634 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 TBX10O75333 385 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 C4BPAP04003 597 aaKnown RBP21.63■■□□□ 1.05
ATG4D-208ENST00000588667 CYP11A1P05108 521 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 TRIM49P0CI25 452 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 TRIM49CP0CI26 452 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 CLCN4P51793 760 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 ZACNQ401N2 412 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 ZNF280DQ6N043 979 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 EP400NLQ6ZTU2 488 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 TMC6Q7Z403 805 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 VSTM4Q8IW00 320 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 SLC22A17Q8WUG5 538 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 CLSTN3Q9BQT9 956 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 METTL14Q9HCE5 456 aaKnown RBP21.63■■□□□ 1.05
ATG4D-208ENST00000588667 PRDM6Q9NQX0 595 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 THEGQ9P2T0 379 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 ARMCX3Q9UH62 379 aaPredicted RBP21.63■■□□□ 1.05
ATG4D-208ENST00000588667 DSEQ9UL01 958 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 UNC80Q8N2C7 3258 aa21.63■■□□□ 1.05
ATG4D-208ENST00000588667 CYB561D2O14569 222 aa21.62■■□□□ 1.05
ATG4D-208ENST00000588667 OAZ2O95190 189 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms