RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 NR2E3Q9Y5X4 410 aa4.37□□□□□ -1.71
VPS4B-203ENST00000588323 LINC01548A6NM66 108 aa4.36□□□□□ -1.71
VPS4B-203ENST00000588323 E7ENX8 843 aa4.36□□□□□ -1.71
VPS4B-203ENST00000588323 SLC43A1O75387 559 aa4.36□□□□□ -1.71
VPS4B-203ENST00000588323 TTLL1O95922 423 aa4.36□□□□□ -1.71
VPS4B-203ENST00000588323 CD1AP06126 327 aa4.36□□□□□ -1.71
VPS4B-203ENST00000588323 POU6F2P78424 691 aaPredicted RBP4.36□□□□□ -1.71
VPS4B-203ENST00000588323 TAP2Q03519 686 aa4.36□□□□□ -1.71
VPS4B-203ENST00000588323 MTX3Q5HYI7 312 aa4.36□□□□□ -1.71
VPS4B-203ENST00000588323 RNF219Q5W0B1 726 aaPredicted RBP4.36□□□□□ -1.71
VPS4B-203ENST00000588323 VGLL2Q8N8G2 317 aa4.36□□□□□ -1.71
VPS4B-203ENST00000588323 TMIEQ8NEW7 156 aa4.36□□□□□ -1.71
VPS4B-203ENST00000588323 HDAC10Q969S8 669 aa4.36□□□□□ -1.71
VPS4B-203ENST00000588323 PBKQ96KB5 322 aa4.36□□□□□ -1.71
VPS4B-203ENST00000588323 PCDHA13Q9Y5I0 950 aa4.36□□□□□ -1.71
VPS4B-203ENST00000588323 WDR27A2RRH5 827 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 IKBKBO14920 756 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 PPM1GO15355 546 aaPredicted RBP4.35□□□□□ -1.71
VPS4B-203ENST00000588323 SGTAO43765 313 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 NPTX2P47972 431 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 HNRNPMP52272 730 aaKnown RBP eCLIP4.35□□□□□ -1.71
VPS4B-203ENST00000588323 SLC16A1P53985 500 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 EIF2B5Q13144 721 aaKnown RBP4.35□□□□□ -1.71
VPS4B-203ENST00000588323 MAPK7Q13164 816 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 KLF1Q13351 362 aaPredicted RBP4.35□□□□□ -1.71
VPS4B-203ENST00000588323 FLYWCH1Q4VC44 716 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 TAPT1Q6NXT6 567 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 GADL1Q6ZQY3 521 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 CAMKK1Q8N5S9 505 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 SEMA6DQ8NFY4 1073 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 LRIG1Q96JA1 1093 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 TRIB1Q96RU8 372 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 SMOQ99835 787 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 SLC45A2Q9UMX9 530 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 ZNF804BA4D1E1 1349 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 CADPSQ9ULU8 1353 aa4.35□□□□□ -1.71
VPS4B-203ENST00000588323 A0A0B4J269 797 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 VWC2LB2RUY7 222 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 K7ESF4 209 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 NDUFS2O75306 463 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 PRR35P0CG20 571 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 NR2F6P10588 404 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 HSD3B2P26439 372 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 CCT8P50990 548 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 ZNF280AP59817 542 aaPredicted RBP4.34□□□□□ -1.71
VPS4B-203ENST00000588323 TUBB3Q13509 450 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 RAB39AQ14964 217 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 TMEM119Q4V9L6 283 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 TMPRSS9Q7Z410 1059 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 FAM9AQ8IZU1 332 aaPredicted RBP4.34□□□□□ -1.71
VPS4B-203ENST00000588323 ATL2Q8NHH9 583 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 ALG8Q9BVK2 526 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 ADGRA2Q96PE1 1338 aa4.34□□□□□ -1.71
VPS4B-203ENST00000588323 TLDC2A0PJX2 215 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 TRIM75PA6NK02 468 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 F5H697 171 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 POLRMTO00411 1230 aaKnown RBP4.33□□□□□ -1.72
VPS4B-203ENST00000588323 TRIAP1O43715 76 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 ANXA1P04083 346 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 HNRNPCP07910 306 aaKnown RBP eCLIP4.33□□□□□ -1.72
VPS4B-203ENST00000588323 EBLN1P0CF75 366 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 KELP23276 732 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 PTGER1P34995 402 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 PLAC9Q5JTB6 97 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 ZNF626Q68DY1 528 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 GIMAP6Q6P9H5 292 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 ZNF782Q6ZMW2 699 aaPredicted RBP4.33□□□□□ -1.72
VPS4B-203ENST00000588323 FBXO41Q8TF61 875 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 FKBP10Q96AY3 582 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 TPSD1Q9BZJ3 242 aa4.33□□□□□ -1.72
VPS4B-203ENST00000588323 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.33□□□□□ -1.72
VPS4B-203ENST00000588323 CCDC180Q9P1Z9 1646 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 SPATA31A3Q5VYP0 1347 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 RHOP08100 348 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 NCLP19338 710 aaKnown RBP4.32□□□□□ -1.72
VPS4B-203ENST00000588323 DRD4P21917 467 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 NDUFV1P49821 464 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 SSBP2P81877 361 aaPredicted RBP4.32□□□□□ -1.72
VPS4B-203ENST00000588323 TFF2Q03403 129 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 ACAP2Q15057 778 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 PPP4R3AQ6IN85 833 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 PGM2L1Q6PCE3 622 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 SLC30A10Q6XR72 485 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 POC1BQ8TC44 478 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 RFKQ969G6 155 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 CLPTM1LQ96KA5 538 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 OSBPL9Q96SU4 736 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 SEMA4CQ9C0C4 833 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 NRIP3Q9NQ35 241 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 MKS1Q9NXB0 559 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 EHD3Q9NZN3 535 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 CALCOCO1Q9P1Z2 691 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 TUBD1Q9UJT1 453 aa4.32□□□□□ -1.72
VPS4B-203ENST00000588323 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.32□□□□□ -1.72
VPS4B-203ENST00000588323 TARM1B6A8C7 271 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 E9PLN8 166 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 TP73O15350 636 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 BMP15O95972 392 aa4.31□□□□□ -1.72
VPS4B-203ENST00000588323 RPLP2P05387 115 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms