RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 ZNF569Q5MCW4 686 aa13.53□□□□□ -0.24
TMED1-204ENST00000588289 C9orf57Q5W0N0 161 aa13.53□□□□□ -0.24
TMED1-204ENST00000588289 SPOPLQ6IQ16 392 aa13.53□□□□□ -0.24
TMED1-204ENST00000588289 SYT10Q6XYQ8 523 aa13.53□□□□□ -0.24
TMED1-204ENST00000588289 SCARA5Q6ZMJ2 495 aa13.53□□□□□ -0.24
TMED1-204ENST00000588289 TMEM35BQ8NCS4 154 aa13.53□□□□□ -0.24
TMED1-204ENST00000588289 APPL2Q8NEU8 664 aa13.53□□□□□ -0.24
TMED1-204ENST00000588289 SPATA18Q8TC71 538 aa13.53□□□□□ -0.24
TMED1-204ENST00000588289 WNT8BQ93098 351 aa13.53□□□□□ -0.24
TMED1-204ENST00000588289 NAPGQ99747 312 aaPredicted RBP13.53□□□□□ -0.24
TMED1-204ENST00000588289 NT5C1AQ9BXI3 368 aa13.53□□□□□ -0.24
TMED1-204ENST00000588289 XYLT2Q9H1B5 865 aa13.53□□□□□ -0.24
TMED1-204ENST00000588289 AGO3Q9H9G7 860 aaKnown RBP13.53□□□□□ -0.24
TMED1-204ENST00000588289 APOBEC3GQ9HC16 384 aaKnown RBP13.53□□□□□ -0.24
TMED1-204ENST00000588289 SIX4Q9UIU6 781 aa13.53□□□□□ -0.24
TMED1-204ENST00000588289 AJAP1Q9UKB5 411 aaPredicted RBP13.53□□□□□ -0.24
TMED1-204ENST00000588289 DSEQ9UL01 958 aa13.53□□□□□ -0.24
TMED1-204ENST00000588289 BARX2Q9UMQ3 279 aaPredicted RBP13.53□□□□□ -0.24
TMED1-204ENST00000588289 ARL5CA6NH57 179 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 KPNA7A9QM74 516 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 CD19P15391 556 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 MLH1P40692 756 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 ASPAP45381 313 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 SLC8A3P57103 927 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 GPC5P78333 572 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 ZBTB6Q15916 424 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 TAF3Q5VWG9 929 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 NOP9Q86U38 636 aaKnown RBP13.52□□□□□ -0.25
TMED1-204ENST00000588289 SLC47A2Q86VL8 602 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 METTL23Q86XA0 190 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 ECHDC2Q86YB7 292 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 TMEM86AQ8N2M4 240 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 TOP6BLQ8N6T0 577 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 SLC30A5Q8TAD4 765 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 RFFLQ8WZ73 363 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 KAT5Q92993 513 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 VCPIP1Q96JH7 1222 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 TNIP3Q96KP6 325 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 MRPL9Q9BYD2 267 aaKnown RBP13.52□□□□□ -0.25
TMED1-204ENST00000588289 TSPYL2Q9H2G4 693 aaPredicted RBP13.52□□□□□ -0.25
TMED1-204ENST00000588289 MRPL47Q9HD33 250 aaKnown RBP13.52□□□□□ -0.25
TMED1-204ENST00000588289 TMEM161AQ9NX61 479 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 KLK14Q9P0G3 267 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 STRIP2Q9ULQ0 834 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 JRKLQ9Y4A0 524 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 PCDHB7Q9Y5E2 793 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 SNX9Q9Y5X1 595 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 SCINQ9Y6U3 715 aa13.52□□□□□ -0.25
TMED1-204ENST00000588289 MICAL3Q7RTP6 2002 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 MACROD2A1Z1Q3 448 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 DDX3XO00571 662 aaKnown RBP eCLIP13.51□□□□□ -0.252e-7■■□□□ 11.9
TMED1-204ENST00000588289 PIRO00625 290 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 CALB1P05937 261 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 CLTBP09497 229 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 PNMA6AP0CW24 399 aaPredicted RBP13.51□□□□□ -0.25
TMED1-204ENST00000588289 VDRP11473 427 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 ACO1P21399 889 aaKnown RBP13.51□□□□□ -0.25
TMED1-204ENST00000588289 TUBB4BP68371 445 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 RNASELQ05823 741 aaKnown RBP13.51□□□□□ -0.25
TMED1-204ENST00000588289 INCA1Q0VD86 236 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 TUSC3Q13454 348 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 SGO2Q562F6 1265 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 GLRA4Q5JXX5 417 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 ACAD10Q6JQN1 1059 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 TMEM176AQ96HP8 235 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 PPP1R10Q96QC0 940 aaKnown RBP13.51□□□□□ -0.25
TMED1-204ENST00000588289 TMEM39AQ9NV64 488 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 GDAP2Q9NXN4 497 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 UVRAGQ9P2Y5 699 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 HESX1Q9UBX0 185 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 NOCTQ9UK39 431 aaKnown RBP13.51□□□□□ -0.25
TMED1-204ENST00000588289 REXO2Q9Y3B8 237 aaKnown RBP13.51□□□□□ -0.25
TMED1-204ENST00000588289 CENPFP49454 3210 aa13.51□□□□□ -0.25
TMED1-204ENST00000588289 TRAPPC3O43617 180 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 FTLP02792 175 aaPredicted RBP13.5□□□□□ -0.25
TMED1-204ENST00000588289 PFKMP08237 780 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 ODC1P11926 461 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 ATN1P54259 1190 aaPredicted RBP13.5□□□□□ -0.25
TMED1-204ENST00000588289 TAP1Q03518 808 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 CLUL1Q15846 466 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 CLEC16AQ2KHT3 1053 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 DSTYKQ6XUX3 929 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 IPO4Q8TEX9 1081 aaKnown RBP13.5□□□□□ -0.25
TMED1-204ENST00000588289 ZMAT2Q96NC0 199 aaKnown RBP13.5□□□□□ -0.25
TMED1-204ENST00000588289 GAD1Q99259 594 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 ARID3AQ99856 593 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 ISCUQ9H1K1 167 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 PRKAG2Q9UGJ0 569 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 TUBGCP4Q9UGJ1 667 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 PCDHGC3Q9UN70 934 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 ATP11BQ9Y2G3 1177 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 BRCA2P51587 3418 aa13.5□□□□□ -0.25
TMED1-204ENST00000588289 NCANO14594 1321 aa13.49□□□□□ -0.25
TMED1-204ENST00000588289 TMCO5BA8MYB1 307 aa13.49□□□□□ -0.25
TMED1-204ENST00000588289 C9IYK1 514 aa13.49□□□□□ -0.25
TMED1-204ENST00000588289 PODXLO00592 558 aa13.49□□□□□ -0.25
TMED1-204ENST00000588289 INPPL1O15357 1258 aa13.49□□□□□ -0.25
TMED1-204ENST00000588289 CILPO75339 1184 aa13.49□□□□□ -0.25
TMED1-204ENST00000588289 URI1O94763 535 aaPredicted RBP13.49□□□□□ -0.25
TMED1-204ENST00000588289 MMEP08473 750 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms