RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 LRMPQ12912 555 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 ADGRE1Q14246 886 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 PTPN21Q16825 1174 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 SOWAHAQ2M3V2 549 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 ZNF667Q5HYK9 610 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 VARS2Q5ST30 1063 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 PLPP4Q5VZY2 271 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 GPR153Q6NV75 609 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 TMC7Q7Z402 723 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 LIMS2Q7Z4I7 341 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 OSTM1Q86WC4 334 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 PDCL2Q8N4E4 241 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 ANKRD20A12PQ8NF67 263 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 RIN2Q8WYP3 895 aaPredicted RBP11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 TAF4BQ92750 862 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 MMS19Q96T76 1030 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 TCF25Q9BQ70 676 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 MRPL45Q9BRJ2 306 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 SDCBP2Q9H190 292 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 ENTPD7Q9NQZ7 604 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 TLR9Q9NR96 1032 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 GCNT4Q9P109 453 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 CHD9Q3L8U1 2897 aa11.49□□□□□ -0.57
SMARCA4-213ENST00000587988 CDH23Q9H251 3354 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 CHD7Q9P2D1 2997 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 GTPBP10A4D1E9 387 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 LGALS16A8MUM7 142 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 HIDE1A8MVS5 230 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 HCRTO43612 131 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 HUS1O60921 280 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 CYP11A1P05108 521 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 URODP06132 367 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 TPM2P07951 284 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 ODC1P11926 461 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 RPL17P18621 184 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 TYMPP19971 482 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 PAX3P23760 479 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 PON1P27169 355 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 ASPAP45381 313 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 RAP1GAPP47736 663 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 GLUD2P49448 558 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 KLK7P49862 253 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 TNNC1P63316 161 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 TPM4P67936 248 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 CETN1Q12798 172 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 MRPL58Q14197 206 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 PTPN14Q15678 1187 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 EXOC3L4Q17RC7 722 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 KIAA1841Q6NSI8 718 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 PHLDB3Q6NSJ2 640 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 DPY19L2P1Q6NXN4 242 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 RSPO2Q6UXX9 243 aaPredicted RBP11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 SCARA5Q6ZMJ2 495 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 GBP6Q6ZN66 633 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 ADGRD2Q7Z7M1 963 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 ARHGEF19Q8IW93 802 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 TOP6BLQ8N6T0 577 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 APPL2Q8NEU8 664 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 LNX1Q8TBB1 728 aaPredicted RBP11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 MICAL1Q8TDZ2 1067 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 KBTBD7Q8WVZ9 684 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 RTP3Q9BQQ7 232 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 ANP32EQ9BTT0 268 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 IMPG2Q9BZV3 1241 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 INTS2Q9H0H0 1204 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 LMAN2LQ9H0V9 348 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 SMYD3Q9H7B4 428 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 SIX2Q9NPC8 291 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 RTN4Q9NQC3 1192 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 NME7Q9Y5B8 376 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 MYO7AQ13402 2215 aa11.48□□□□□ -0.57
SMARCA4-213ENST00000587988 A0A1B0GTH6 734 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 C2orf71A6NGG8 1288 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 ADAM12O43184 909 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 AP5Z1O43299 807 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 TBC1D4O60343 1298 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 OAZ2O95190 189 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 SERPINC1P01008 464 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 WEE2P0C1S8 567 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 LMO2P25791 158 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 CA8P35219 290 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 UBXN1Q04323 297 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 YWHAHQ04917 246 aaPredicted RBP11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 SMC1AQ14683 1233 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 PSMD5Q16401 504 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 WDR44Q5JSH3 913 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 OVOS1Q6IE37 1185 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 GJB7Q6PEY0 223 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 TRIM65Q6PJ69 517 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 RRAGAQ7L523 313 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 DPH6Q7L8W6 267 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 GLYCTKQ8IVS8 523 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 ADGRF2Q8IZF7 708 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 DEFB123Q8N688 67 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 MRPL43Q8N983 215 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 CCDC150Q8NCX0 1101 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 PIK3R5Q8WYR1 880 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 KAT5Q92993 513 aa11.47□□□□□ -0.57
SMARCA4-213ENST00000587988 MRPL38Q96DV4 380 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms