RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 THPOP40225 353 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 NCBP1Q09161 790 aaKnown RBP10.9□□□□□ -0.66
APOC1-201ENST00000586638 TRIM71Q2Q1W2 868 aaKnown RBP10.9□□□□□ -0.66
APOC1-201ENST00000586638 GLRA4Q5JXX5 417 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 ALKBH5Q6P6C2 394 aaKnown RBP10.9□□□□□ -0.66
APOC1-201ENST00000586638 MICALL1Q8N3F8 863 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 RBBP8NLQ8NC74 664 aaPredicted RBP10.9□□□□□ -0.66
APOC1-201ENST00000586638 SLC30A5Q8TAD4 765 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 FAM81BQ96LP2 452 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 NAPGQ99747 312 aaPredicted RBP10.9□□□□□ -0.66
APOC1-201ENST00000586638 OSBPL7Q9BZF2 842 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 XYLT2Q9H1B5 865 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 ASB7Q9H672 318 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 LUC7LQ9NQ29 371 aaKnown RBP10.9□□□□□ -0.66
APOC1-201ENST00000586638 RNF19AQ9NV58 838 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 MYO1AQ9UBC5 1043 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 SALL4Q9UJQ4 1053 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 PCDHB4Q9Y5E5 795 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 PCDHA11Q9Y5I1 949 aa10.9□□□□□ -0.66
APOC1-201ENST00000586638 NCANO14594 1321 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 ATP8B3O60423 1300 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 UQCRHLA0A096LP55 91 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 ZBBXA8MT70 800 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 RPS6KA5O75582 802 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 URI1O94763 535 aaPredicted RBP10.89□□□□□ -0.67
APOC1-201ENST00000586638 UQCRHP07919 91 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 GHRP10912 638 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 BMP1P13497 986 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 CD58P19256 250 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 AKAP5P24588 427 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 ASPAP45381 313 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 RAP1GAPP47736 663 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 YARSP54577 528 aaKnown RBP10.89□□□□□ -0.67
APOC1-201ENST00000586638 FMO1Q01740 532 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 POU5F1Q01860 360 aaKnown RBP10.89□□□□□ -0.67
APOC1-201ENST00000586638 PTK7Q13308 1070 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 NAB2Q15742 525 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 AAK1Q2M2I8 961 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 PPP2R2DQ66LE6 453 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 TWF2Q6IBS0 349 aaKnown RBP10.89□□□□□ -0.67
APOC1-201ENST00000586638 ZNF710Q8N1W2 664 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 TXLNBQ8N3L3 684 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 SMG8Q8ND04 991 aaKnown RBP10.89□□□□□ -0.67
APOC1-201ENST00000586638 CXorf38Q8TB03 319 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 FAM122AQ96E09 287 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 PCDHB18PQ96TA0 734 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 SDCBP2Q9H190 292 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 SMYD3Q9H7B4 428 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 ERVK-5Q9HDB9 667 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 KLK14Q9P0G3 267 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 TUBGCP4Q9UGJ1 667 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 PARP2Q9UGN5 583 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 NOD1Q9Y239 953 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 IPPQ9Y573 584 aa10.89□□□□□ -0.67
APOC1-201ENST00000586638 PPEF2O14830 753 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 TACC1O75410 805 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 ATP1A1P05023 1023 aaKnown RBP10.88□□□□□ -0.67
APOC1-201ENST00000586638 H2AFZP0C0S5 128 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 MYOGP15173 224 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 ATP2A2P16615 1042 aaKnown RBP10.88□□□□□ -0.67
APOC1-201ENST00000586638 ABCB4P21439 1286 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 CD52P31358 61 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 SSTR3P32745 418 aaPredicted RBP10.88□□□□□ -0.67
APOC1-201ENST00000586638 GALCP54803 685 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 NAP1L1P55209 391 aaKnown RBP10.88□□□□□ -0.67
APOC1-201ENST00000586638 CDR2Q01850 454 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 PTPN11Q06124 597 aaPredicted RBP10.88□□□□□ -0.67
APOC1-201ENST00000586638 NFX1Q12986 1120 aaKnown RBP10.88□□□□□ -0.67
APOC1-201ENST00000586638 SKIV2LQ15477 1246 aaKnown RBP10.88□□□□□ -0.67
APOC1-201ENST00000586638 SGSM1Q2NKQ1 1148 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 ZNF667Q5HYK9 610 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 C10orf76Q5T2E6 689 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 TMEM270Q6UE05 265 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 H2AFVQ71UI9 128 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 RPAINQ86UA6 219 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 CD302Q8IX05 232 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 LRRN4CLQ8ND94 238 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 MYRIPQ8NFW9 859 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 DDX1Q92499 740 aaKnown RBP10.88□□□□□ -0.67
APOC1-201ENST00000586638 C18orf25Q96B23 403 aaPredicted RBP10.88□□□□□ -0.67
APOC1-201ENST00000586638 SCLYQ96I15 445 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 ZMAT2Q96NC0 199 aaKnown RBP10.88□□□□□ -0.67
APOC1-201ENST00000586638 WNT8AQ9H1J5 351 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 RNF39Q9H2S5 420 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 AGO3Q9H9G7 860 aaKnown RBP10.88□□□□□ -0.67
APOC1-201ENST00000586638 DPP3Q9NY33 737 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 CNTN3Q9P232 1028 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 NXF1Q9UBU9 619 aaKnown RBP10.88□□□□□ -0.67
APOC1-201ENST00000586638 ITGA11Q9UKX5 1188 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 ST3GAL5Q9UNP4 418 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 AGAP1Q9UPQ3 857 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 C2CD2Q9Y426 696 aa10.88□□□□□ -0.67
APOC1-201ENST00000586638 TDRD15B5MCY1 1934 aaKnown RBP10.88□□□□□ -0.67
APOC1-201ENST00000586638 CDH23Q9H251 3354 aa10.87□□□□□ -0.67
APOC1-201ENST00000586638 TSC2P49815 1807 aa10.87□□□□□ -0.67
APOC1-201ENST00000586638 CTAGE9A4FU28 777 aa10.87□□□□□ -0.67
APOC1-201ENST00000586638 ATMINO43313 823 aaPredicted RBP10.87□□□□□ -0.67
APOC1-201ENST00000586638 MGEA5O60502 916 aa10.87□□□□□ -0.67
APOC1-201ENST00000586638 RPLP2P05387 115 aaKnown RBP10.87□□□□□ -0.67
APOC1-201ENST00000586638 IBSPP21815 317 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms