RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 STK39Q9UEW8 545 aa17.37■□□□□ 0.37
ATG4D-205ENST00000586477 UBQLN1Q9UMX0 589 aaKnown RBP17.37■□□□□ 0.37
ATG4D-205ENST00000586477 MYO10Q9HD67 2058 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 LACTBL1A8MY62 500 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 TEX28O15482 410 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 TNNC2P02585 160 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 URODP06132 367 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 TMEM191BP0C7N4 346 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 DLATP10515 647 aaKnown RBP17.36■□□□□ 0.37
ATG4D-205ENST00000586477 ZNF18P17022 549 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 CYP3A5P20815 502 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 GLUD2P49448 558 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 CLDN10P78369 228 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 SOX4Q06945 474 aaPredicted RBP17.36■□□□□ 0.37
ATG4D-205ENST00000586477 BMS1Q14692 1282 aaKnown RBP17.36■□□□□ 0.37
ATG4D-205ENST00000586477 MAN2A1Q16706 1144 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 DUOXA2Q1HG44 320 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 FILIP1LQ4L180 1135 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 DCAF17Q5H9S7 520 aaPredicted RBP17.36■□□□□ 0.37
ATG4D-205ENST00000586477 RTP2Q5QGT7 225 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 RARS2Q5T160 578 aaKnown RBP17.36■□□□□ 0.37
ATG4D-205ENST00000586477 TCERG1LQ5VWI1 586 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 TRIM59Q8IWR1 403 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 BEST2Q8NFU1 509 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 POMKQ9H5K3 350 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 GOLGA2P5Q9HBQ8 144 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 SAMSN1Q9NSI8 373 aaKnown RBP17.36■□□□□ 0.37
ATG4D-205ENST00000586477 DOCK6Q96HP0 2047 aa17.36■□□□□ 0.37
ATG4D-205ENST00000586477 SMIM28A0A1B0GU29 152 aa17.35■□□□□ 0.37
ATG4D-205ENST00000586477 TULP1O00294 542 aaPredicted RBP17.35■□□□□ 0.37
ATG4D-205ENST00000586477 TPM3P06753 285 aa17.35■□□□□ 0.37
ATG4D-205ENST00000586477 PAX3P23760 479 aa17.35■□□□□ 0.37
ATG4D-205ENST00000586477 KLRC2P26717 231 aa17.35■□□□□ 0.37
ATG4D-205ENST00000586477 TMEM130Q8N3G9 435 aa17.35■□□□□ 0.37
ATG4D-205ENST00000586477 KIF12Q96FN5 646 aa17.35■□□□□ 0.37
ATG4D-205ENST00000586477 BORCS6Q96GS4 357 aa17.35■□□□□ 0.37
ATG4D-205ENST00000586477 RPGRIP1Q96KN7 1286 aa17.35■□□□□ 0.37
ATG4D-205ENST00000586477 UROC1Q96N76 676 aa17.35■□□□□ 0.37
ATG4D-205ENST00000586477 TUBGCP2Q9BSJ2 902 aa17.35■□□□□ 0.37
ATG4D-205ENST00000586477 PDE11AQ9HCR9 933 aa17.35■□□□□ 0.37
ATG4D-205ENST00000586477 DZANK1Q9NVP4 752 aa17.35■□□□□ 0.37
ATG4D-205ENST00000586477 MUTYHQ9UIF7 546 aa17.35■□□□□ 0.37
ATG4D-205ENST00000586477 ARIH1Q9Y4X5 557 aaPredicted RBP17.35■□□□□ 0.37
ATG4D-205ENST00000586477 P4HA2O15460 535 aa17.34■□□□□ 0.37
ATG4D-205ENST00000586477 AFPP02771 609 aaKnown RBP17.34■□□□□ 0.37
ATG4D-205ENST00000586477 ITIH3Q06033 890 aa17.34■□□□□ 0.37
ATG4D-205ENST00000586477 UVSSAQ2YD98 709 aa17.34■□□□□ 0.37
ATG4D-205ENST00000586477 USP41Q3LFD5 358 aa17.34■□□□□ 0.37
ATG4D-205ENST00000586477 PRSS55Q6UWB4 352 aaPredicted RBP17.34■□□□□ 0.37
ATG4D-205ENST00000586477 PPFIBP1Q86W92 1011 aa17.34■□□□□ 0.37
ATG4D-205ENST00000586477 IRF2BP1Q8IU81 584 aa17.34■□□□□ 0.37
ATG4D-205ENST00000586477 RNF214Q8ND24 703 aa17.34■□□□□ 0.37
ATG4D-205ENST00000586477 C3orf58Q8NDZ4 430 aa17.34■□□□□ 0.37
ATG4D-205ENST00000586477 ZSWIM2Q8NEG5 633 aa17.34■□□□□ 0.37
ATG4D-205ENST00000586477 SLC35C1Q96A29 364 aa17.34■□□□□ 0.37
ATG4D-205ENST00000586477 DDX27Q96GQ7 796 aaKnown RBP17.34■□□□□ 0.37
ATG4D-205ENST00000586477 EMILIN2Q9BXX0 1053 aa17.34■□□□□ 0.37
ATG4D-205ENST00000586477 INTS13Q9NVM9 706 aa17.34■□□□□ 0.37
ATG4D-205ENST00000586477 LIMA1Q9UHB6 759 aaKnown RBP17.34■□□□□ 0.37
ATG4D-205ENST00000586477 ITGA11Q9UKX5 1188 aa17.34■□□□□ 0.37
ATG4D-205ENST00000586477 ANK1P16157 1881 aa17.33■□□□□ 0.37
ATG4D-205ENST00000586477 LRRC10BA6NIK2 292 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 PMM2O15305 246 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 TADA2AO75478 443 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 SERPINC1P01008 464 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 RPL17P18621 184 aaKnown RBP17.33■□□□□ 0.36
ATG4D-205ENST00000586477 RPL9P32969 192 aaKnown RBP17.33■□□□□ 0.36
ATG4D-205ENST00000586477 MXI1P50539 228 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 CLCNKBP51801 687 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 TFAMQ00059 246 aaKnown RBP17.33■□□□□ 0.36
ATG4D-205ENST00000586477 FKBP15Q5T1M5 1219 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 KRT39Q6A163 491 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 JADE1Q6IE81 842 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 KIAA1841Q6NSI8 718 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 TMC5Q6UXY8 1006 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 GPR65Q8IYL9 337 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 CCDC150Q8NCX0 1101 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 RIN2Q8WYP3 895 aaPredicted RBP17.33■□□□□ 0.36
ATG4D-205ENST00000586477 TMEM8AQ9HCN3 771 aa17.33■□□□□ 0.36
ATG4D-205ENST00000586477 SF3B1O75533 1304 aaKnown RBP eCLIP17.32■□□□□ 0.36
ATG4D-205ENST00000586477 LRRIQ3A6PVS8 624 aaPredicted RBP17.32■□□□□ 0.36
ATG4D-205ENST00000586477 TMEM189-UBE2V1I3L0A0 370 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 PHACTR2O75167 634 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 NFICP08651 508 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 SP100P23497 879 aaPredicted RBP17.32■□□□□ 0.36
ATG4D-205ENST00000586477 PNPLA4P41247 253 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 BIRC3Q13489 604 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 KRT31Q15323 416 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 UPP1Q16831 310 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 VWA3BQ502W6 1294 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 LILRA6Q6PI73 481 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 LNX1Q8TBB1 728 aaPredicted RBP17.32■□□□□ 0.36
ATG4D-205ENST00000586477 C18orf25Q96B23 403 aaPredicted RBP17.32■□□□□ 0.36
ATG4D-205ENST00000586477 IMPG2Q9BZV3 1241 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 MAN1C1Q9NR34 630 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 FNIP2Q9P278 1114 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 SSX2IPQ9Y2D8 614 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 DOCK8Q8NF50 2099 aa17.32■□□□□ 0.36
ATG4D-205ENST00000586477 GTPBP10A4D1E9 387 aaKnown RBP17.31■□□□□ 0.36
ATG4D-205ENST00000586477 C2CD4DB7Z1M9 353 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms