RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 KIF3AQ9Y496 699 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 DNAH14Q0VDD8 3507 aa21.84■■□□□ 1.09
CLPTM1-204ENST00000585961 OR6C75A6NL08 312 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 H0YCG3 227 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 K7ENM7 598 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 HNRNPDLO14979 420 aaKnown RBP21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 CHRNB1P11230 501 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 NMT1P30419 496 aaKnown RBP21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 UBA7P41226 1012 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 ACOT2P49753 483 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 LILRA4P59901 499 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 C8orf34Q49A92 452 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 ARMCX5Q6P1M9 558 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 LEMD2Q8NC56 503 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 DEPDC1BQ8WUY9 529 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 SECISBP2LQ93073 1101 aaKnown RBP21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 ZFYVE19Q96K21 471 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 MSTO1Q9BUK6 570 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 EPC1Q9H2F5 836 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 ATXN3LQ9H3M9 355 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 TRPV5Q9NQA5 729 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 KCND2Q9NZV8 630 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 USP18Q9UMW8 372 aa21.83■■□□□ 1.09
CLPTM1-204ENST00000585961 F5P12259 2224 aa21.83■■□□□ 1.08
CLPTM1-204ENST00000585961 CITO14578 2027 aa21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 A0A0B4J269 797 aa21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 SLC38A8A6NNN8 435 aa21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 ANKRD63C9JTQ0 380 aa21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 XPOTO43592 962 aaKnown RBP21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 KRT18P05783 430 aaKnown RBP21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 AARSP49588 968 aaKnown RBP eCLIP21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 SATB1Q01826 763 aa21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 GRIN1Q05586 938 aa21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 GAS6Q14393 721 aa21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 SPATA1Q5VX52 437 aa21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 ARL6IP4Q66PJ3 421 aaKnown RBP21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 SLC39A4Q6P5W5 647 aa21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 GAREM2Q75VX8 874 aa21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 CALML4Q96GE6 196 aa21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 GPR88Q9GZN0 384 aa21.82■■□□□ 1.08
CLPTM1-204ENST00000585961 FANCMQ8IYD8 2048 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 MTMR11A4FU01 709 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 TISP43B9A030 160 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 TRAK2O60296 914 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 FAM189A1O60320 539 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 CD2BP2O95400 341 aaKnown RBP21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 NFICP08651 508 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 TDGF1P13385 188 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 CXCL12P48061 93 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 ATXN1P54253 815 aaKnown RBP21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 NRLP54845 237 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 DMWDQ09019 674 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 PLD1Q13393 1074 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 KARSQ15046 597 aaKnown RBP21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 KYAT1Q16773 422 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 ZC2HC1CQ53FD0 456 aaPredicted RBP21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 GPR158Q5T848 1215 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 C9orf57Q5W0N0 161 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 KCTD17Q8N5Z5 321 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 FAM200AQ8TCP9 573 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 GIPC2Q8TF65 315 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 OXCT2Q9BYC2 517 aaPredicted RBP21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 IKZF4Q9H2S9 585 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 PARVGQ9HBI0 331 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 BLOC1S4Q9NUP1 217 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 ODF2LQ9ULJ1 636 aa21.81■■□□□ 1.08
CLPTM1-204ENST00000585961 ARNTLO00327 626 aa21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 DPYSL4O14531 572 aa21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 PLCG1P19174 1290 aa21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 TYMPP19971 482 aa21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 GABRR2P28476 465 aa21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 HOXC13P31276 330 aa21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 MYBPC2Q14324 1141 aa21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 RABEP1Q15276 862 aa21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 SLC39A12Q504Y0 691 aa21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 HEATR6Q6AI08 1181 aaKnown RBP21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 PRR23BQ6ZRT6 265 aa21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 RASSF8Q8NHQ8 419 aa21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 SEPT5Q99719 369 aaPredicted RBP21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 LPIN3Q9BQK8 851 aa21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 PARD6AQ9NPB6 346 aa21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 CPSF3Q9UKF6 684 aaKnown RBP21.8■■□□□ 1.08
CLPTM1-204ENST00000585961 DCDC2BA2VCK2 349 aa21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 CHURC1-FNTBB4DL54 471 aa21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 CHADO15335 359 aa21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 ADRB2P07550 413 aa21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 ODC1P11926 461 aa21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 TGM1P22735 817 aa21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 FNTBP49356 437 aa21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 CCR3P51677 355 aa21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 SPEM2Q0P670 501 aa21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 SRSF5Q13243 272 aaKnown RBP21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 MGAT5BQ3V5L5 792 aa21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 LARP1BQ659C4 914 aaKnown RBP21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 OR10T2Q8NGX3 314 aa21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 E2F7Q96AV8 911 aa21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 MKNK1Q9BUB5 465 aa21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 FAM126AQ9BYI3 521 aaPredicted RBP21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 SMG9Q9H0W8 520 aaKnown RBP21.79■■□□□ 1.08
CLPTM1-204ENST00000585961 GTSE1Q9NYZ3 720 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms