RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 VN1R3Q9BXE9 311 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 EMILIN2Q9BXX0 1053 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 OXCT2Q9BYC2 517 aaPredicted RBP15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 DNAI2Q9GZS0 605 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 NDST4Q9H3R1 872 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 CHST7Q9NS84 486 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 NXF1Q9UBU9 619 aaKnown RBP15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 LIMA1Q9UHB6 759 aaKnown RBP15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 COQ4Q9Y3A0 265 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 FSD2A1L4K1 749 aa15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 GTPBP10A4D1E9 387 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 C2CD2LO14523 706 aa15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 ASS1P00966 412 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 IGFBP4P22692 258 aa15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 DNAJB1P25685 340 aa15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 NOP14P78316 857 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 PSMD5Q16401 504 aa15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 DPH6Q7L8W6 267 aa15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 TAS1R1Q7RTX1 841 aa15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 THEM5Q8N1Q8 247 aa15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 PIK3R5Q8WYR1 880 aa15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 FAXDC2Q96IV6 333 aa15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 NT5C1BQ96P26 610 aa15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 XYLT2Q9H1B5 865 aa15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 GCNT4Q9P109 453 aa15.65■□□□□ 0.1
SCAMP4-209ENST00000585335 FSCN2O14926 492 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 SERPINC1P01008 464 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 CYP11A1P05108 521 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 FAM163BP0C2L3 166 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 TRIM21P19474 475 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 IGFBP6P24592 240 aaPredicted RBP15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 SCN1AP35498 2009 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 COPB1P53618 953 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 ERVFC1P60507 584 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 PTPN14Q15678 1187 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 EXOC3L4Q17RC7 722 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 RTP2Q5QGT7 225 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 VARS2Q5ST30 1063 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 OVOS1Q6IE37 1185 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 Q7L0L9 218 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 ADGRF2Q8IZF7 708 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 TTC39CQ8N584 583 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 MRPL43Q8N983 215 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 B3GALT6Q96L58 329 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 PI4K2AQ9BTU6 479 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 NIF3L1Q9GZT8 377 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 VPS16Q9H269 839 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 NSUN3Q9H649 340 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 IRAK3Q9Y616 596 aa15.64■□□□□ 0.09
SCAMP4-209ENST00000585335 OR6C75A6NL08 312 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 ADH1AP07327 375 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 POU3F3P20264 500 aaPredicted RBP15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 TBXAS1P24557 533 aaPredicted RBP15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 LHX1P48742 406 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 NDUFV1P49821 464 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 YWHAEP62258 255 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 CTXN3Q4LDR2 81 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 MIIPQ5JXC2 388 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 KIAA0319Q5VV43 1072 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 WSCD1Q658N2 575 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 SCARA5Q6ZMJ2 495 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 PDCL2Q8N4E4 241 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 EHBP1Q8NDI1 1231 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 AUTS2Q8WXX7 1259 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 SEMA4DQ92854 862 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 FAM81BQ96LP2 452 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 INTS2Q9H0H0 1204 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 HSD3B7Q9H2F3 369 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 SNX25Q9H3E2 840 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 CYP3A43Q9HB55 503 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 FNIP2Q9P278 1114 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 L1RE1Q9UN81 338 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 TIMM13Q9Y5L4 95 aaPredicted RBP15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 BACE2Q9Y5Z0 518 aa15.63■□□□□ 0.09
SCAMP4-209ENST00000585335 C2orf71A6NGG8 1288 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 LRRC10BA6NIK2 292 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 LGALS16A8MUM7 142 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 TACC1O75410 805 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 OAZ2O95190 189 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 TPM3P06753 285 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 ATP1A3P13637 1013 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 FOSL2P15408 326 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 PCSK1P29120 753 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 IRS1P35568 1242 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 TSPY1Q01534 308 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 CAMK1Q14012 370 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 SOWAHAQ2M3V2 549 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 SPOPLQ6IQ16 392 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 ELMSAN1Q6PJG2 1045 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 PRSS55Q6UWB4 352 aaPredicted RBP15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 PPFIBP1Q86W92 1011 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 RNF214Q8ND24 703 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 LNX1Q8TBB1 728 aaPredicted RBP15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 MYLIPQ8WY64 445 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 CDCA3Q99618 268 aaPredicted RBP15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 CDX2Q99626 313 aaPredicted RBP15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 FAM124BQ9H5Z6 455 aaPredicted RBP15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 TLE6Q9H808 572 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 RXFP1Q9HBX9 757 aa15.62■□□□□ 0.09
SCAMP4-209ENST00000585335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms