RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 MTMR2Q13614 643 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 CYP4F22Q6NT55 531 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 ASRGL1Q7L266 308 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 RCOR2Q8IZ40 523 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 KCNN1Q92952 543 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 HAPLN2Q9GZV7 340 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 IP6K2Q9UHH9 426 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 PNMA3Q9UL41 463 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 DNALI1O14645 258 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 GCAP28676 217 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 FOXN2P32314 431 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 ELF1P32519 619 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 SSTR3P32745 418 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 WDR4P57081 412 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 IL9RQ01113 521 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 MGAT5Q09328 741 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 TMED2Q15363 201 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 GLIS1Q8NBF1 620 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 RBBP8NLQ8NC74 664 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 WNK4Q96J92 1243 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 FHDC1Q9C0D6 1143 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 EBF2Q9HAK2 575 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 SLC9A2Q9UBY0 812 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 DNPEPQ9ULA0 475 aa15.03■□□□□ -0
CDK5RAP3-237ENST00000585163 ZNF541Q9H0D2 1346 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 LOC102724159A0A0B4J2E5 919 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 A0A1B0GUA9 196 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 EXOC1LA0A1B0GW35 172 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 TBXAS1P24557 533 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 ACTR2P61160 394 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 CCDC15Q0P6D6 951 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 PWP2Q15269 919 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 ATP13A4Q4VNC1 1196 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 ABHD15Q6UXT9 468 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 TRABD2AQ86V40 505 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 TDRPQ86YL5 185 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 ATG4CQ96DT6 458 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 RBM41Q96IZ5 413 aaKnown RBP15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 TEPSINQ96N21 525 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 TTC25Q96NG3 672 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 SLITRK1Q96PX8 696 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 PITPNM3Q9BZ71 974 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 SAYSD1Q9NPB0 183 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 UBN1Q9NPG3 1134 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 GINM1Q9NU53 330 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 RBAKQ9NYW8 714 aaPredicted RBP15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 ZNRF3Q9ULT6 936 aa15.02■□□□□ -0
CDK5RAP3-237ENST00000585163 MAGEB2O15479 319 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TJP3O95049 919 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ASMTLO95671 621 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PIGRP01833 764 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 KRT10P13645 584 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 CCNB1P14635 433 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 IBSPP21815 317 aaPredicted RBP15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 MMP8P22894 467 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SKIV2L2P42285 1042 aaKnown RBP15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 RPL7AP62424 266 aaKnown RBP15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 NOP14P78316 857 aaKnown RBP15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SP4Q02446 784 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 EMC2Q15006 297 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 CCDC142Q17RM4 750 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TLDC1Q6P9B6 456 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TTLL6Q8N841 843 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 NSUN6Q8TEA1 469 aaKnown RBP15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 KLHL11Q9NVR0 708 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 NUB1Q9Y5A7 615 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 DOCK5Q9H7D0 1870 aa15.02□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TMEM191CA6NGB0 347 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PI4K2BG5E9Z4 385 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 KRT16P08779 473 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TMEM191BP0C7N4 346 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TCF4P15884 667 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SLC18A1P54219 525 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 MTERF2Q49AM1 385 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 EAPPQ56P03 285 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 XKR3Q5GH77 459 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SLFN12LQ6IEE8 588 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ECHDC2Q86YB7 292 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ALLCQ8N6M5 410 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ANKLE1Q8NAG6 615 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ZBTB45Q96K62 511 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ZNF148Q9UQR1 794 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PARP14Q460N5 1801 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PRPF4O43172 522 aaKnown RBP eCLIP15.01□□□□□ -0.013e-6■■□□□ 13.5
CDK5RAP3-237ENST00000585163 MCL1Q07820 350 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 LRRC38Q5VT99 294 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 KAZNQ674X7 775 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 MFSD7Q6UXD7 560 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 KIF2BQ8N4N8 673 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 DENND1AQ8TEH3 1009 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 AGAP11Q8TF27 550 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ZNF606Q8WXB4 792 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 N4BP2L2Q92802 583 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 CDHR1Q96JP9 859 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 CGRRF1Q99675 332 aa15.01□□□□□ -0.01
CDK5RAP3-237ENST00000585163 LDHAP00338 332 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ZSCAN5DPP0CG00 497 aa15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PECAM1P16284 738 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ATF7P17544 494 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ARSEP51690 589 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms