RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 REEP2Q9BRK0 252 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 LRRC3Q9BY71 257 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 EPC1Q9H2F5 836 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 CHRDQ9H2X0 955 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 YIPF1Q9Y548 306 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 GTF3C3Q9Y5Q9 886 aa16.3■□□□□ 0.2
VAPA-209ENST00000585042 CACNA1AO00555 2505 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 FAM13AO94988 1023 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 WEE1P30291 646 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 GDI1P31150 447 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 TNFSF9P41273 254 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 GTF2BQ00403 316 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 DUSP4Q13115 394 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 GRM2Q14416 872 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 SLFN12LQ6IEE8 588 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 CENPPQ6IPU0 288 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 ARMCX5Q6P1M9 558 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 BRAPQ7Z569 592 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 FAM3CQ92520 227 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 RMDN1Q96DB5 314 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 ST6GALNAC4Q9H4F1 302 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 ASB7Q9H672 318 aa16.29■□□□□ 0.2
VAPA-209ENST00000585042 CPSF3Q9UKF6 684 aaKnown RBP16.29■□□□□ 0.2
VAPA-209ENST00000585042 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.29■□□□□ 0.2
VAPA-209ENST00000585042 TIMM13Q9Y5L4 95 aaPredicted RBP16.29■□□□□ 0.2
VAPA-209ENST00000585042 PIRO00625 290 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 CHADO15335 359 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 VNN2O95498 520 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 CYP11A1P05108 521 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 ODC1P11926 461 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 TUFMP49411 452 aaKnown RBP16.28■□□□□ 0.2
VAPA-209ENST00000585042 SPAG1Q07617 926 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 SMARCB1Q12824 385 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 MTAPQ13126 283 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 TEAD2Q15562 447 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 LARP1BQ659C4 914 aaKnown RBP16.28■□□□□ 0.2
VAPA-209ENST00000585042 ITIH5Q86UX2 942 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 SHKBP1Q8TBC3 707 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 PSMG2Q969U7 264 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 SENP8Q96LD8 212 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 MSTO1Q9BUK6 570 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 C8orf33Q9H7E9 229 aaPredicted RBP16.28■□□□□ 0.2
VAPA-209ENST00000585042 BLOC1S4Q9NUP1 217 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 OBP2AQ9NY56 170 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 DLL3Q9NYJ7 618 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 NCDNQ9UBB6 729 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 DSEQ9UL01 958 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 SMC3Q9UQE7 1217 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 STYXL1Q9Y6J8 313 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 F5P12259 2224 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 DMXL1Q9Y485 3027 aa16.28■□□□□ 0.2
VAPA-209ENST00000585042 ANO9A1A5B4 782 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 HEPACAM2A8MVW5 462 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 K7ENM7 598 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 ARNTLO00327 626 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 DDIT3P35638 169 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 VIPR2P41587 438 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 CCR3P51677 355 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 FCHO2Q0JRZ9 810 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 C9orf57Q5W0N0 161 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 JADE1Q6IE81 842 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 DGLUCYQ7Z3D6 616 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 DNAJB7Q7Z6W7 309 aaPredicted RBP16.27■□□□□ 0.2
VAPA-209ENST00000585042 TMC8Q8IU68 726 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 YAF2Q8IY57 180 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 DCLK2Q8N568 766 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 CSGALNACT1Q8TDX6 532 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 RAD54LQ92698 747 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 FIZ1Q96SL8 496 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 CCSER1Q9C0I3 900 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 DNAJC25Q9H1X3 360 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 SLITRK6Q9H5Y7 841 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 LMAN1LQ9HAT1 526 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 ZMYM5Q9UJ78 669 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 NDRG2Q9UN36 371 aaKnown RBP16.27■□□□□ 0.2
VAPA-209ENST00000585042 C2CD2Q9Y426 696 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 PIAS3Q9Y6X2 628 aa16.27■□□□□ 0.2
VAPA-209ENST00000585042 COL4A3Q01955 1670 aa16.27■□□□□ 0.19
VAPA-209ENST00000585042 MTMR11A4FU01 709 aa16.26■□□□□ 0.19
VAPA-209ENST00000585042 NRG2O14511 850 aaPredicted RBP16.26■□□□□ 0.19
VAPA-209ENST00000585042 KRT18P05783 430 aaKnown RBP16.26■□□□□ 0.19
VAPA-209ENST00000585042 OR4Q2P0C623 313 aa16.26■□□□□ 0.19
VAPA-209ENST00000585042 MCM6Q14566 821 aa16.26■□□□□ 0.19
VAPA-209ENST00000585042 TMEM132DQ14C87 1099 aa16.26■□□□□ 0.19
VAPA-209ENST00000585042 POSTNQ15063 836 aa16.26■□□□□ 0.19
VAPA-209ENST00000585042 CELF5Q8N6W0 485 aaKnown RBP16.26■□□□□ 0.19
VAPA-209ENST00000585042 C2orf15Q8WU43 125 aaKnown RBP16.26■□□□□ 0.19
VAPA-209ENST00000585042 LARP4BQ92615 738 aaKnown RBP16.26■□□□□ 0.19
VAPA-209ENST00000585042 PGLYRP2Q96PD5 576 aa16.26■□□□□ 0.19
VAPA-209ENST00000585042 A0A1W2PRU2 124 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 PRR5-ARHGAP8B1AHC4 643 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 TBCAO75347 108 aaKnown RBP16.25■□□□□ 0.19
VAPA-209ENST00000585042 CHRNB1P11230 501 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 TDGF1P13385 188 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 GJA1P17302 382 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 PLCG1P19174 1290 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 ARHGAP8P85298 464 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 DHX8Q14562 1220 aaKnown RBP16.25■□□□□ 0.19
VAPA-209ENST00000585042 ARHGAP29Q52LW3 1261 aa16.25■□□□□ 0.19
VAPA-209ENST00000585042 ARHGAP15Q53QZ3 475 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms