RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 UNQ6494/PRO21346Q6UXR6 183 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 UNC13DQ70J99 1090 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 SV2BQ7L1I2 683 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 EXOC8Q8IYI6 725 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 SMYD4Q8IYR2 804 aaPredicted RBP10.66□□□□□ -0.7
MKS1-212ENST00000583577 SLC44A3Q8N4M1 653 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 SNX29Q8TEQ0 813 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 COG1Q8WTW3 980 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 ZBTB10Q96DT7 871 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 CCDC42Q96M95 316 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 TSG101Q99816 390 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 HSD17B14Q9BPX1 270 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 NIFKQ9BYG3 293 aaKnown RBP10.66□□□□□ -0.7
MKS1-212ENST00000583577 BLZF1Q9H2G9 400 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 ZSCAN32Q9NX65 697 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 LHX6Q9UPM6 363 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 PPME1Q9Y570 386 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 PCDHA2Q9Y5H9 948 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 COL4A3Q01955 1670 aa10.66□□□□□ -0.7
MKS1-212ENST00000583577 KDM3AQ9Y4C1 1321 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 SMIM35A0A1B0GVV1 85 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 ZBTB42B2RXF5 422 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 M0QZ92 97 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 CES2O00748 559 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 OPA1O60313 960 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 TBC1D4O60343 1298 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 GDF9O60383 454 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 MGEA5O60502 916 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 MED24O75448 989 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 LYPLA2O95372 231 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 C22orf31O95567 290 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 FGFR1P11362 822 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 YWHABP31946 246 aaKnown RBP10.65□□□□□ -0.7
MKS1-212ENST00000583577 GBP2P32456 591 aaPredicted RBP10.65□□□□□ -0.7
MKS1-212ENST00000583577 MTIF2P46199 727 aaKnown RBP10.65□□□□□ -0.7
MKS1-212ENST00000583577 VSNL1P62760 191 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 MAPK8IP2Q13387 824 aaPredicted RBP10.65□□□□□ -0.7
MKS1-212ENST00000583577 XKR9Q5GH70 373 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 C10orf76Q5T2E6 689 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 IER5Q5VY09 327 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 EMBQ6PCB8 327 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 WDR59Q6PJI9 974 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 TSSK4Q6SA08 328 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 ANO5Q75V66 913 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 GPR149Q86SP6 731 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 CATSPER3Q86XQ3 398 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 NME8Q8N427 588 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 METTL13Q8N6R0 699 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 ZBTB44Q8NCP5 570 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 C1orf131Q8NDD1 294 aaKnown RBP10.65□□□□□ -0.7
MKS1-212ENST00000583577 AUTS2Q8WXX7 1259 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 CEP170P1Q96L14 293 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 CNOT6LQ96LI5 555 aaKnown RBP10.65□□□□□ -0.7
MKS1-212ENST00000583577 CEP63Q96MT8 703 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 ZNF558Q96NG5 402 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 NACC1Q96RE7 527 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 PNKPQ96T60 521 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 DUSP9Q99956 384 aaKnown RBP10.65□□□□□ -0.7
MKS1-212ENST00000583577 JPH2Q9BR39 696 aaPredicted RBP10.65□□□□□ -0.7
MKS1-212ENST00000583577 BCO2Q9BYV7 579 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 IRX2Q9BZI1 471 aaPredicted RBP10.65□□□□□ -0.7
MKS1-212ENST00000583577 NT5C3AQ9H0P0 336 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 NHEJ1Q9H9Q4 299 aaPredicted RBP10.65□□□□□ -0.7
MKS1-212ENST00000583577 ANKEF1Q9NU02 776 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 SPG21Q9NZD8 308 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 WRAP73Q9P2S5 460 aaPredicted RBP10.65□□□□□ -0.7
MKS1-212ENST00000583577 RAB23Q9ULC3 237 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 GUCA1BQ9UMX6 200 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 GDAQ9Y2T3 454 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 REXO2Q9Y3B8 237 aaKnown RBP10.65□□□□□ -0.7
MKS1-212ENST00000583577 TRPV2Q9Y5S1 764 aa10.65□□□□□ -0.7
MKS1-212ENST00000583577 ASXL3Q9C0F0 2248 aa10.65□□□□□ -0.71
MKS1-212ENST00000583577 GREB1Q4ZG55 1949 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.64□□□□□ -0.71
MKS1-212ENST00000583577 DENND3A2RUS2 1198 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 TMEM150BA6NC51 233 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 GOLGA8KD6RF30 607 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 LILRB5O75023 590 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 STBD1O95210 358 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 SPATA31C1P0DKV0 1188 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 PPM1AP35813 382 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 PAFAH1B1P43034 410 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 POLGP54098 1239 aaPredicted RBP10.64□□□□□ -0.71
MKS1-212ENST00000583577 RING1Q06587 406 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 MCM6Q14566 821 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 TARBP2Q15633 366 aaKnown RBP10.64□□□□□ -0.71
MKS1-212ENST00000583577 VWA3BQ502W6 1294 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 ALS2CLQ60I27 953 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 PLA2G4FQ68DD2 849 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 IL31Q6EBC2 164 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 EFCAB12Q6NXP0 572 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 PPP4R3CPQ6ZMV5 832 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 FMNL3Q8IVF7 1028 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 SLC7A3Q8WY07 619 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 DDX1Q92499 740 aaKnown RBP10.64□□□□□ -0.71
MKS1-212ENST00000583577 CDK5RAP3Q96JB5 506 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 ADAM2Q99965 735 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 SH2D3AQ9BRG2 576 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 CRACR2AQ9BSW2 395 aa10.64□□□□□ -0.71
MKS1-212ENST00000583577 ATP6V0A4Q9HBG4 840 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms