RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 MFSD1Q9H3U5 465 aa26.89■■□□□ 1.9
TSEN54-209ENST00000583454 ZNF292O60281 2723 aa26.89■■□□□ 1.9
TSEN54-209ENST00000583454 FRYLO94915 3013 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 AOC1P19801 751 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 WNT7BP56706 349 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 CEP57Q86XR8 500 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 CBWD2Q8IUF1 395 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 SLC9A9Q8IVB4 645 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 EFCAB13Q8IY85 973 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 TMEM130Q8N3G9 435 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 SLC44A3Q8N4M1 653 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 XXYLT1Q8NBI6 393 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 BEST2Q8NFU1 509 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 GBP4Q96PP9 640 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 PIDD1Q9HB75 910 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 DMAC2Q9NW81 257 aa26.88■■□□□ 1.89
TSEN54-209ENST00000583454 FAM186AA6NE01 2351 aa26.87■■□□□ 1.89
TSEN54-209ENST00000583454 PROB1E7EW31 1015 aa26.87■■□□□ 1.89
TSEN54-209ENST00000583454 TRAPPC3O43617 180 aa26.87■■□□□ 1.89
TSEN54-209ENST00000583454 LAMP2P13473 410 aa26.87■■□□□ 1.89
TSEN54-209ENST00000583454 FGFR3P22607 806 aa26.87■■□□□ 1.89
TSEN54-209ENST00000583454 CYP2J2P51589 502 aa26.87■■□□□ 1.89
TSEN54-209ENST00000583454 GUCY2FP51841 1108 aa26.87■■□□□ 1.89
TSEN54-209ENST00000583454 ZNF658Q5TYW1 1059 aaPredicted RBP26.87■■□□□ 1.89
TSEN54-209ENST00000583454 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.87■■□□□ 1.89
TSEN54-209ENST00000583454 SIX5Q8N196 739 aa26.87■■□□□ 1.89
TSEN54-209ENST00000583454 FLCNQ8NFG4 579 aa26.87■■□□□ 1.89
TSEN54-209ENST00000583454 GTPBP4Q9BZE4 634 aaKnown RBP26.87■■□□□ 1.89
TSEN54-209ENST00000583454 LMBRD1Q9NUN5 540 aa26.87■■□□□ 1.89
TSEN54-209ENST00000583454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.87■■□□□ 1.89
TSEN54-209ENST00000583454 MAPK8IP1Q9UQF2 711 aa26.87■■□□□ 1.89
TSEN54-209ENST00000583454 TRAF3IP3Q9Y228 551 aa26.87■■□□□ 1.89
TSEN54-209ENST00000583454 KRBA1A5PL33 1030 aa26.86■■□□□ 1.89
TSEN54-209ENST00000583454 ANHXE9PGG2 379 aa26.86■■□□□ 1.89
TSEN54-209ENST00000583454 HTR4Q13639 388 aa26.86■■□□□ 1.89
TSEN54-209ENST00000583454 SNRNP35Q16560 246 aaKnown RBP26.86■■□□□ 1.89
TSEN54-209ENST00000583454 COBLL1Q53SF7 1204 aa26.86■■□□□ 1.89
TSEN54-209ENST00000583454 RSPO2Q6UXX9 243 aaPredicted RBP26.86■■□□□ 1.89
TSEN54-209ENST00000583454 GET4Q7L5D6 327 aaPredicted RBP26.86■■□□□ 1.89
TSEN54-209ENST00000583454 NOC3LQ8WTT2 800 aaKnown RBP26.86■■□□□ 1.89
TSEN54-209ENST00000583454 PDE11AQ9HCR9 933 aa26.86■■□□□ 1.89
TSEN54-209ENST00000583454 ANO9A1A5B4 782 aa26.85■■□□□ 1.89
TSEN54-209ENST00000583454 PIRO00625 290 aa26.85■■□□□ 1.89
TSEN54-209ENST00000583454 BRCC3P46736 316 aa26.85■■□□□ 1.89
TSEN54-209ENST00000583454 MYBPC2Q14324 1141 aa26.85■■□□□ 1.89
TSEN54-209ENST00000583454 SURF1Q15526 300 aa26.85■■□□□ 1.89
TSEN54-209ENST00000583454 SMYD4Q8IYR2 804 aaPredicted RBP26.85■■□□□ 1.89
TSEN54-209ENST00000583454 NXPE3Q969Y0 559 aa26.85■■□□□ 1.89
TSEN54-209ENST00000583454 DPP3Q9NY33 737 aa26.85■■□□□ 1.89
TSEN54-209ENST00000583454 MTRRQ9UBK8 725 aa26.85■■□□□ 1.89
TSEN54-209ENST00000583454 WNT16Q9UBV4 365 aa26.85■■□□□ 1.89
TSEN54-209ENST00000583454 SCN1AP35498 2009 aa26.85■■□□□ 1.89
TSEN54-209ENST00000583454 PTPRZ1P23471 2315 aaPredicted RBP26.84■■□□□ 1.89
TSEN54-209ENST00000583454 GVINP1Q7Z2Y8 2422 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 GFRA3O60609 400 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 C8AP07357 584 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 CFHP08603 1231 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 HNRNPA1P09651 372 aaKnown RBP eCLIP26.84■■□□□ 1.89
TSEN54-209ENST00000583454 SRFP11831 508 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 HOXA9P31269 272 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 NTHL1P78549 312 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 RAB33AQ14088 237 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 NFIL3Q16649 462 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 C9orf57Q5W0N0 161 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 PDXDC1Q6P996 788 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 GRASPQ7Z6J2 395 aaPredicted RBP26.84■■□□□ 1.89
TSEN54-209ENST00000583454 SUSD3Q96L08 255 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 MAN1B1Q9UKM7 699 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 FBXL21Q9UKT6 434 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 NUB1Q9Y5A7 615 aa26.84■■□□□ 1.89
TSEN54-209ENST00000583454 I3L4J1 428 aa26.83■■□□□ 1.89
TSEN54-209ENST00000583454 CALUO43852 315 aaPredicted RBP26.83■■□□□ 1.89
TSEN54-209ENST00000583454 NR3C1P04150 777 aa26.83■■□□□ 1.89
TSEN54-209ENST00000583454 NBL1P41271 181 aa26.83■■□□□ 1.89
TSEN54-209ENST00000583454 PRCPP42785 496 aa26.83■■□□□ 1.89
TSEN54-209ENST00000583454 AARSP49588 968 aaKnown RBP eCLIP26.83■■□□□ 1.89
TSEN54-209ENST00000583454 CCDC105Q8IYK2 499 aa26.83■■□□□ 1.89
TSEN54-209ENST00000583454 RDH13Q8NBN7 331 aa26.83■■□□□ 1.89
TSEN54-209ENST00000583454 CACTINQ8WUQ7 758 aaKnown RBP26.83■■□□□ 1.89
TSEN54-209ENST00000583454 PPEF2O14830 753 aa26.82■■□□□ 1.88
TSEN54-209ENST00000583454 EXOC3O60645 756 aa26.82■■□□□ 1.88
TSEN54-209ENST00000583454 POU2F2P09086 479 aa26.82■■□□□ 1.88
TSEN54-209ENST00000583454 PAX3P23760 479 aa26.82■■□□□ 1.88
TSEN54-209ENST00000583454 FSHRP23945 695 aa26.82■■□□□ 1.88
TSEN54-209ENST00000583454 TKTP29401 623 aaKnown RBP26.82■■□□□ 1.88
TSEN54-209ENST00000583454 OR1D2P34982 312 aa26.82■■□□□ 1.88
TSEN54-209ENST00000583454 TFAMQ00059 246 aaKnown RBP26.82■■□□□ 1.88
TSEN54-209ENST00000583454 CYP24A1Q07973 514 aa26.82■■□□□ 1.88
TSEN54-209ENST00000583454 PSMD6Q15008 389 aa26.82■■□□□ 1.88
TSEN54-209ENST00000583454 ZCWPW2Q504Y3 356 aa26.82■■□□□ 1.88
TSEN54-209ENST00000583454 LIN9Q5TKA1 542 aa26.82■■□□□ 1.88
TSEN54-209ENST00000583454 ST13P5Q8NFI4 369 aaPredicted RBP26.82■■□□□ 1.88
TSEN54-209ENST00000583454 INTS13Q9NVM9 706 aa26.82■■□□□ 1.88
TSEN54-209ENST00000583454 NUMBLQ9Y6R0 609 aa26.82■■□□□ 1.88
TSEN54-209ENST00000583454 M0QZQ0 153 aa26.81■■□□□ 1.88
TSEN54-209ENST00000583454 SYN3O14994 580 aa26.81■■□□□ 1.88
TSEN54-209ENST00000583454 LILRA4P59901 499 aa26.81■■□□□ 1.88
TSEN54-209ENST00000583454 PPM1LQ5SGD2 360 aa26.81■■□□□ 1.88
TSEN54-209ENST00000583454 CXorf38Q8TB03 319 aa26.81■■□□□ 1.88
TSEN54-209ENST00000583454 SLC7A14Q8TBB6 771 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms