RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 WDR49Q8IV35 697 aa15.07■□□□□ 0
GGA3-215ENST00000582821 ELOA2Q8IYF1 753 aaPredicted RBP15.07■□□□□ 0
GGA3-215ENST00000582821 CSGALNACT2Q8N6G5 542 aa15.07■□□□□ 0
GGA3-215ENST00000582821 TDRD5Q8NAT2 981 aaKnown RBP15.07■□□□□ 0
GGA3-215ENST00000582821 SLC7A14Q8TBB6 771 aa15.07■□□□□ 0
GGA3-215ENST00000582821 NOC3LQ8WTT2 800 aaKnown RBP15.07■□□□□ 0
GGA3-215ENST00000582821 ANKRD36BP1Q96IX9 119 aa15.07■□□□□ 0
GGA3-215ENST00000582821 MUTYHQ9UIF7 546 aa15.07■□□□□ 0
GGA3-215ENST00000582821 SIX4Q9UIU6 781 aa15.07■□□□□ 0
GGA3-215ENST00000582821 AGAP1Q9UPQ3 857 aa15.07■□□□□ 0
GGA3-215ENST00000582821 CLUHO75153 1309 aa15.07■□□□□ 0
GGA3-215ENST00000582821 ITGB3P05106 788 aa15.06■□□□□ 0
GGA3-215ENST00000582821 TMEM191BP0C7N4 346 aa15.06■□□□□ 0
GGA3-215ENST00000582821 POLR2BP30876 1174 aaKnown RBP15.06■□□□□ 0
GGA3-215ENST00000582821 CYP2J2P51589 502 aa15.06■□□□□ 0
GGA3-215ENST00000582821 CYP24A1Q07973 514 aa15.06■□□□□ 0
GGA3-215ENST00000582821 GUF1Q8N442 669 aaKnown RBP15.06■□□□□ 0
GGA3-215ENST00000582821 RDH13Q8NBN7 331 aa15.06■□□□□ 0
GGA3-215ENST00000582821 OR5B17Q8NGF7 314 aa15.06■□□□□ 0
GGA3-215ENST00000582821 EDAQ92838 391 aa15.06■□□□□ 0
GGA3-215ENST00000582821 TSHZ2Q9NRE2 1034 aa15.06■□□□□ 0
GGA3-215ENST00000582821 GDAP2Q9NXN4 497 aa15.06■□□□□ 0
GGA3-215ENST00000582821 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.06■□□□□ 0
GGA3-215ENST00000582821 CHMP5Q9NZZ3 219 aa15.06■□□□□ 0
GGA3-215ENST00000582821 TRAF3IP3Q9Y228 551 aa15.06■□□□□ 0
GGA3-215ENST00000582821 CCL16O15467 120 aa15.05■□□□□ -0
GGA3-215ENST00000582821 EXOC3O60645 756 aa15.05■□□□□ -0
GGA3-215ENST00000582821 N4BP1O75113 896 aaKnown RBP15.05■□□□□ -0
GGA3-215ENST00000582821 SEC24AO95486 1093 aa15.05■□□□□ -0
GGA3-215ENST00000582821 TNNC2P02585 160 aa15.05■□□□□ -0
GGA3-215ENST00000582821 ARPP19P56211 112 aa15.05■□□□□ -0
GGA3-215ENST00000582821 ZXDAP98168 799 aa15.05■□□□□ -0
GGA3-215ENST00000582821 NFIL3Q16649 462 aa15.05■□□□□ -0
GGA3-215ENST00000582821 RNF19BQ6ZMZ0 732 aa15.05■□□□□ -0
GGA3-215ENST00000582821 METTL23Q86XA0 190 aa15.05■□□□□ -0
GGA3-215ENST00000582821 SPATA20Q8TB22 786 aa15.05■□□□□ -0
GGA3-215ENST00000582821 SPATA18Q8TC71 538 aa15.05■□□□□ -0
GGA3-215ENST00000582821 GSDMAQ96QA5 445 aa15.05■□□□□ -0
GGA3-215ENST00000582821 FNBP1Q96RU3 617 aa15.05■□□□□ -0
GGA3-215ENST00000582821 MTMR12Q9C0I1 747 aa15.05■□□□□ -0
GGA3-215ENST00000582821 GZF1Q9H116 711 aaPredicted RBP15.05■□□□□ -0
GGA3-215ENST00000582821 C11orf16Q9NQ32 467 aa15.05■□□□□ -0
GGA3-215ENST00000582821 AVENQ9NQS1 362 aaPredicted RBP15.05■□□□□ -0
GGA3-215ENST00000582821 EPS15L1Q9UBC2 864 aa15.05■□□□□ -0
GGA3-215ENST00000582821 HSFX1Q9UBD0 423 aa15.05■□□□□ -0
GGA3-215ENST00000582821 LIMD1Q9UGP4 676 aa15.05■□□□□ -0
GGA3-215ENST00000582821 ZFP37Q9Y6Q3 630 aaPredicted RBP15.05■□□□□ -0
GGA3-215ENST00000582821 PTPRJQ12913 1337 aa15.05■□□□□ -0
GGA3-215ENST00000582821 TSC2P49815 1807 aa15.05■□□□□ -0
GGA3-215ENST00000582821 PRRG1O14668 218 aa15.04■□□□□ -0
GGA3-215ENST00000582821 LRG1P02750 347 aa15.04■□□□□ -0
GGA3-215ENST00000582821 CPB1P15086 417 aa15.04■□□□□ -0
GGA3-215ENST00000582821 SP100P23497 879 aaPredicted RBP15.04■□□□□ -0
GGA3-215ENST00000582821 CLDN10P78369 228 aa15.04■□□□□ -0
GGA3-215ENST00000582821 ADCY1Q08828 1119 aa15.04■□□□□ -0
GGA3-215ENST00000582821 SMARCB1Q12824 385 aa15.04■□□□□ -0
GGA3-215ENST00000582821 PTPN21Q16825 1174 aa15.04■□□□□ -0
GGA3-215ENST00000582821 TMEM31Q5JXX7 168 aa15.04■□□□□ -0
GGA3-215ENST00000582821 WSCD1Q658N2 575 aa15.04■□□□□ -0
GGA3-215ENST00000582821 SCARA3Q6AZY7 606 aa15.04■□□□□ -0
GGA3-215ENST00000582821 DPH6Q7L8W6 267 aa15.04■□□□□ -0
GGA3-215ENST00000582821 TRAPPC11Q7Z392 1133 aa15.04■□□□□ -0
GGA3-215ENST00000582821 LIMS2Q7Z4I7 341 aa15.04■□□□□ -0
GGA3-215ENST00000582821 GRASPQ7Z6J2 395 aaPredicted RBP15.04■□□□□ -0
GGA3-215ENST00000582821 THEM5Q8N1Q8 247 aa15.04■□□□□ -0
GGA3-215ENST00000582821 TMEM86AQ8N2M4 240 aa15.04■□□□□ -0
GGA3-215ENST00000582821 MYADMQ96S97 322 aa15.04■□□□□ -0
GGA3-215ENST00000582821 CGRRF1Q99675 332 aa15.04■□□□□ -0
GGA3-215ENST00000582821 RTP3Q9BQQ7 232 aa15.04■□□□□ -0
GGA3-215ENST00000582821 CYP4F11Q9HBI6 524 aa15.04■□□□□ -0
GGA3-215ENST00000582821 DNMT3BQ9UBC3 853 aaKnown RBP15.04■□□□□ -0
GGA3-215ENST00000582821 INSL5Q9Y5Q6 135 aa15.04■□□□□ -0
GGA3-215ENST00000582821 MAPK13O15264 365 aa15.03■□□□□ -0
GGA3-215ENST00000582821 CALUO43852 315 aaPredicted RBP15.03■□□□□ -0
GGA3-215ENST00000582821 VNN2O95498 520 aa15.03■□□□□ -0
GGA3-215ENST00000582821 NR3C1P04150 777 aa15.03■□□□□ -0
GGA3-215ENST00000582821 KRT19P08727 400 aa15.03■□□□□ -0
GGA3-215ENST00000582821 FAM163BP0C2L3 166 aa15.03■□□□□ -0
GGA3-215ENST00000582821 DLATP10515 647 aaKnown RBP15.03■□□□□ -0
GGA3-215ENST00000582821 PTPN2P17706 415 aa15.03■□□□□ -0
GGA3-215ENST00000582821 TNNI1P19237 187 aa15.03■□□□□ -0
GGA3-215ENST00000582821 FSHRP23945 695 aa15.03■□□□□ -0
GGA3-215ENST00000582821 ANP32AP39687 249 aaKnown RBP15.03■□□□□ -0
GGA3-215ENST00000582821 AP3M2P53677 418 aa15.03■□□□□ -0
GGA3-215ENST00000582821 MCCD1P59942 119 aaPredicted RBP15.03■□□□□ -0
GGA3-215ENST00000582821 MYO1EQ12965 1108 aa15.03■□□□□ -0
GGA3-215ENST00000582821 PNOCQ13519 176 aa15.03■□□□□ -0
GGA3-215ENST00000582821 COBLL1Q53SF7 1204 aa15.03■□□□□ -0
GGA3-215ENST00000582821 LMBRD2Q68DH5 695 aaPredicted RBP15.03■□□□□ -0
GGA3-215ENST00000582821 CENPPQ6IPU0 288 aa15.03■□□□□ -0
GGA3-215ENST00000582821 TOP6BLQ8N6T0 577 aa15.03■□□□□ -0
GGA3-215ENST00000582821 OR10T2Q8NGX3 314 aa15.03■□□□□ -0
GGA3-215ENST00000582821 PARD3BQ8TEW8 1205 aa15.03■□□□□ -0
GGA3-215ENST00000582821 ZNF516Q92618 1163 aa15.03■□□□□ -0
GGA3-215ENST00000582821 NXPE3Q969Y0 559 aa15.03■□□□□ -0
GGA3-215ENST00000582821 CCDC127Q96BQ5 260 aa15.03■□□□□ -0
GGA3-215ENST00000582821 FAM84AQ96KN4 292 aa15.03■□□□□ -0
GGA3-215ENST00000582821 LRFN3Q9BTN0 628 aa15.03■□□□□ -0
GGA3-215ENST00000582821 GTPBP4Q9BZE4 634 aaKnown RBP15.03■□□□□ -0
GGA3-215ENST00000582821 ZCWPW1Q9H0M4 648 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms