RNA–Protein interactions for RNA: ENST00000582583.4

CCDC144NL-AS1-216, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene CCDC144NL-AS1, Length 1,670 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-216ENST00000582583 REXO1L1PQ8IX06 675 aa13.32□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 PDCL2Q8N4E4 241 aa13.32□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 BAG1Q99933 345 aaPredicted RBP13.32□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 NGRNQ9NPE2 291 aaKnown RBP13.32□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 TRANK1O15050 2925 aa13.32□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 I3L4J1 428 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 FSCN2O14926 492 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 SLU7O95391 586 aaKnown RBP13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 FGFR1OPO95684 399 aaKnown RBP13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 TRIM49P0CI25 452 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 TRIM49CP0CI26 452 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 CA8P35219 290 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 AP3M2P53677 418 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 CLDN10P78369 228 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 ENPEPQ07075 957 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 USP41Q3LFD5 358 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 TIGD5Q53EQ6 642 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 FAM171A1Q5VUB5 890 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 TRAPPC11Q7Z392 1133 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 ZNF516Q92618 1163 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 BORCS6Q96GS4 357 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 ZNF560Q96MR9 790 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 PANX2Q96RD6 677 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 LIMA1Q9UHB6 759 aaKnown RBP13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 SIX4Q9UIU6 781 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 AGAP1Q9UPQ3 857 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 PCDHGC5Q9Y5F6 944 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 URODP06132 367 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 GLUD2P49448 558 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 TAF6P49848 677 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 LILRA4P59901 499 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 RBP5P82980 135 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 SMC1AQ14683 1233 aaKnown RBP13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 CCDC40Q4G0X9 1142 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 FILIP1LQ4L180 1135 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 C1orf220Q5T0J3 134 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 KIAA1841Q6NSI8 718 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 CEP57Q86XR8 500 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 MICALL1Q8N3F8 863 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 CXorf38Q8TB03 319 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 AUTS2Q8WXX7 1259 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 SUSD3Q96L08 255 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 B3GALT6Q96L58 329 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 TTPALQ9BTX7 342 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 NAA15Q9BXJ9 866 aaKnown RBP13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 NSUN3Q9H649 340 aaKnown RBP13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 METTL14Q9HCE5 456 aaKnown RBP13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 CHST7Q9NS84 486 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 ARMCX3Q9UH62 379 aaPredicted RBP13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 PPP2R2CQ9Y2T4 447 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 ATG2AQ2TAZ0 1938 aa13.31□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 LRRC10BA6NIK2 292 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 C2CD2LO14523 706 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 PHACTR2O75167 634 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 CXCL14O95715 111 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 GNA14O95837 355 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 C4BPAP04003 597 aaKnown RBP13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 FECHP22830 423 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 PAX3P23760 479 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 PNPLA4P41247 253 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 AARSP49588 968 aaKnown RBP eCLIP13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 DSG1Q02413 1049 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 BIRC3Q13489 604 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 SV2CQ496J9 727 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 HSP90AA4PQ58FG1 418 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 DCAF17Q5H9S7 520 aaPredicted RBP13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 RTP2Q5QGT7 225 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 TCERG1LQ5VWI1 586 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 TDRD10Q5VZ19 366 aaKnown RBP13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 SCARA3Q6AZY7 606 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 TRIM65Q6PJ69 517 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 DSTYKQ6XUX3 929 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 FRMD5Q7Z6J6 570 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 LRRC52Q8N7C0 313 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 PPP2R3CQ969Q6 453 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 MRPL17Q9NRX2 175 aaKnown RBP13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 SSX2IPQ9Y2D8 614 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 SCN1AP35498 2009 aa13.3□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 PRRC2BQ5JSZ5 2229 aaKnown RBP13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 C2orf71A6NGG8 1288 aa13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 HIDE1A8MVS5 230 aa13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 AKR1B15C9JRZ8 316 aaPredicted RBP13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 SPTLC1O15269 473 aa13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 FGFR3P22607 806 aa13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 TKTP29401 623 aaKnown RBP13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 MCCD1P59942 119 aaPredicted RBP13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 PPP3CAQ08209 521 aa13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 TRPC3Q13507 836 aa13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 ZACNQ401N2 412 aa13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 TCEAL5Q5H9L2 206 aa13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 KIAA0319Q5VV43 1072 aa13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 SYT10Q6XYQ8 523 aa13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 SV2AQ7L0J3 742 aa13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 MRPL43Q8N983 215 aaKnown RBP13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 RIN2Q8WYP3 895 aaPredicted RBP13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 MMRN2Q9H8L6 949 aa13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 IRAK3Q9Y616 596 aa13.29□□□□□ -0.28
CCDC144NL-AS1-216ENST00000582583 VWA8A3KMH1 1905 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms