RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 LNX1Q8TBB1 728 aaPredicted RBP12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 HPDLQ96IR7 371 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 ZNF560Q96MR9 790 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 KLHL5Q96PQ7 755 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 IGFLR1Q9H665 355 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 RXFP1Q9HBX9 757 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 PLXNA4Q9HCM2 1894 aa12.97□□□□□ -0.33
SNRPD1-204ENST00000582475 CYB561D2O14569 222 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 STX10O60499 249 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 CCDC192P0DO97 292 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 NRIP1P48552 1158 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 PPP3CAQ08209 521 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 MYO1EQ12965 1108 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 ZACNQ401N2 412 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 TCERG1LQ5VWI1 586 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 TDRD10Q5VZ19 366 aaKnown RBP12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 PDXDC1Q6P996 788 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 PRSS55Q6UWB4 352 aaPredicted RBP12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 C15orf39Q6ZRI6 1047 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 ENOX1Q8TC92 643 aaKnown RBP12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 PIK3R5Q8WYR1 880 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 EMILIN2Q9BXX0 1053 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 MMRN2Q9H8L6 949 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 TMEM8AQ9HCN3 771 aa12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 RTN4Q9NQC3 1192 aaKnown RBP12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.96□□□□□ -0.332e-6■■■■□ 19.9
SNRPD1-204ENST00000582475 TIMM13Q9Y5L4 95 aaPredicted RBP12.96□□□□□ -0.33
SNRPD1-204ENST00000582475 SCN1AP35498 2009 aa12.96□□□□□ -0.34
SNRPD1-204ENST00000582475 ARHGEF37A1IGU5 675 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 SYCE3A1L190 88 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 H7C4K7 107 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 NCK2O43639 380 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 CLASP2O75122 1294 aaKnown RBP12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 VNN1O95497 513 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 CNPP09543 421 aaKnown RBP12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 TYMPP19971 482 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 KLRC2P26717 231 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 ATICP31939 592 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 MARSP56192 900 aaKnown RBP12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 MYL6P60660 151 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 HYAL1Q12794 435 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 NCOA4Q13772 614 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 MRPL58Q14197 206 aaKnown RBP12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 PSMD5Q16401 504 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 DUSP6Q16828 381 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 SGSM1Q2NKQ1 1148 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 DCAF17Q5H9S7 520 aaPredicted RBP12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 KRT39Q6A163 491 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 C11orf57Q6ZUT1 292 aaPredicted RBP12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 ANKS3Q6ZW76 656 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 IRF2BP1Q8IU81 584 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 CDCA3Q99618 268 aaPredicted RBP12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 DNAJC25Q9H1X3 360 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 THAP9Q9H5L6 903 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 GDAP2Q9NXN4 497 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 FNIP2Q9P278 1114 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 SNX9Q9Y5X1 595 aa12.95□□□□□ -0.34
SNRPD1-204ENST00000582475 TEX28O15482 410 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 HUS1O60921 280 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 STAU1O95793 577 aaKnown RBP12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 HLA-DRAP01903 254 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 CYP11A1P05108 521 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 ODC1P11926 461 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 RPL17P18621 184 aaKnown RBP12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 GTF2F1P35269 517 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 CREMQ03060 361 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 SKIV2LQ15477 1246 aaKnown RBP12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 PPFIBP1Q86W92 1011 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 METTL23Q86XA0 190 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 TRIM59Q8IWR1 403 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 MAFAQ8NHW3 353 aaPredicted RBP12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 SLC35C1Q96A29 364 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 CNOT6LQ96LI5 555 aaKnown RBP12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 CLSTN3Q9BQT9 956 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 FUCA2Q9BTY2 467 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 NAT10Q9H0A0 1025 aaKnown RBP12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 MAGEC2Q9UBF1 373 aaPredicted RBP12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 DSEQ9UL01 958 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 BACE2Q9Y5Z0 518 aa12.94□□□□□ -0.34
SNRPD1-204ENST00000582475 ARHGAP33O14559 1287 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 TBC1D4O60343 1298 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 OAZ2O95190 189 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 ADH1AP07327 375 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 MTIF2P46199 727 aaKnown RBP12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 MXI1P50539 228 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 YWHAHQ04917 246 aaPredicted RBP12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 KCNH2Q12809 1159 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 ADAM15Q13444 863 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 WDR72Q3MJ13 1102 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 ZSCAN23Q3MJ62 389 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 ANO6Q4KMQ2 910 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 CTXN3Q4LDR2 81 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 WSCD1Q658N2 575 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 RSPO2Q6UXX9 243 aaPredicted RBP12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 DPH6Q7L8W6 267 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 PALB2Q86YC2 1186 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 GLYCTKQ8IVS8 523 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 FAM114A1Q8IWE2 563 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 THEM5Q8N1Q8 247 aa12.93□□□□□ -0.34
SNRPD1-204ENST00000582475 TOP6BLQ8N6T0 577 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms