RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 DUOXA2Q1HG44 320 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 SLC27A1Q6PCB7 646 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 IRF2BP2Q7Z5L9 587 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 KIAA1328Q86T90 577 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 OR5B17Q8NGF7 314 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 PABPC5Q96DU9 382 aaKnown RBP13.5□□□□□ -0.25
SRSF1-204ENST00000581979 ANKRD36BP1Q96IX9 119 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 PI4K2AQ9BTU6 479 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.5□□□□□ -0.253e-6■□□□□ 10.5
SRSF1-204ENST00000581979 GPR88Q9GZN0 384 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 HAUS4Q9H6D7 363 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 ELAC1Q9H777 363 aaKnown RBP13.5□□□□□ -0.25
SRSF1-204ENST00000581979 LZTFL1Q9NQ48 299 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 KIAA1671Q9BY89 1806 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 KIF2AO00139 706 aaPredicted RBP13.5□□□□□ -0.25
SRSF1-204ENST00000581979 NCK2O43639 380 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 VNN1O95497 513 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 KCNA5P22460 613 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 GATMP50440 423 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 TFAMQ00059 246 aaKnown RBP13.5□□□□□ -0.25
SRSF1-204ENST00000581979 POU5F1Q01860 360 aaKnown RBP13.5□□□□□ -0.25
SRSF1-204ENST00000581979 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.5□□□□□ -0.25
SRSF1-204ENST00000581979 FAM81BQ96LP2 452 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 CCDC94Q9BW85 323 aaPredicted RBP13.5□□□□□ -0.25
SRSF1-204ENST00000581979 MTMR12Q9C0I1 747 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 TMEM161AQ9NX61 479 aa13.5□□□□□ -0.25
SRSF1-204ENST00000581979 PIN4Q9Y237 131 aaKnown RBP13.5□□□□□ -0.25
SRSF1-204ENST00000581979 REXO2Q9Y3B8 237 aaKnown RBP13.5□□□□□ -0.25
SRSF1-204ENST00000581979 FNDC1Q4ZHG4 1894 aaPredicted RBP13.5□□□□□ -0.25
SRSF1-204ENST00000581979 HOXA11P31270 313 aaPredicted RBP13.49□□□□□ -0.25
SRSF1-204ENST00000581979 USP8P40818 1118 aa13.49□□□□□ -0.25
SRSF1-204ENST00000581979 GRM5P41594 1212 aa13.49□□□□□ -0.25
SRSF1-204ENST00000581979 PRKCIP41743 596 aa13.49□□□□□ -0.25
SRSF1-204ENST00000581979 CYP27A1Q02318 531 aa13.49□□□□□ -0.25
SRSF1-204ENST00000581979 CAMK1Q14012 370 aa13.49□□□□□ -0.25
SRSF1-204ENST00000581979 ASTE1Q2TB18 679 aaPredicted RBP13.49□□□□□ -0.25
SRSF1-204ENST00000581979 PAN2Q504Q3 1202 aaKnown RBP13.49□□□□□ -0.25
SRSF1-204ENST00000581979 ARHGAP29Q52LW3 1261 aa13.49□□□□□ -0.25
SRSF1-204ENST00000581979 EFCAB13Q8IY85 973 aa13.49□□□□□ -0.25
SRSF1-204ENST00000581979 HELQQ8TDG4 1101 aa13.49□□□□□ -0.25
SRSF1-204ENST00000581979 ZNF592Q92610 1267 aa13.49□□□□□ -0.25
SRSF1-204ENST00000581979 KAT5Q92993 513 aa13.49□□□□□ -0.25
SRSF1-204ENST00000581979 TATDN2Q93075 761 aa13.49□□□□□ -0.25
SRSF1-204ENST00000581979 ACAP3Q96P50 834 aa13.49□□□□□ -0.25
SRSF1-204ENST00000581979 TRIM6Q9C030 488 aaPredicted RBP13.49□□□□□ -0.25
SRSF1-204ENST00000581979 CITO14578 2027 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 A0A0U1RQJ8 604 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 LACTBL1A8MY62 500 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 FOXN3O00409 490 aaPredicted RBP13.48□□□□□ -0.25
SRSF1-204ENST00000581979 TUBB4AP04350 444 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 ITGB1P05556 798 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 PTK2Q05397 1052 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 GFPT1Q06210 699 aaPredicted RBP13.48□□□□□ -0.25
SRSF1-204ENST00000581979 TRPC3Q13507 836 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 NCOA4Q13772 614 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 CTC1Q2NKJ3 1217 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 PUS10Q3MIT2 529 aaKnown RBP13.48□□□□□ -0.25
SRSF1-204ENST00000581979 ENOSF1Q7L5Y1 443 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 TRAPPC11Q7Z392 1133 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 ZNF571Q7Z3V5 609 aaPredicted RBP13.48□□□□□ -0.25
SRSF1-204ENST00000581979 VPS36Q86VN1 386 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 KLHL23Q8NBE8 558 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 SPPL3Q8TCT6 385 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 ATRIPQ8WXE1 791 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 JAKMIP2Q96AA8 810 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 ELMO3Q96BJ8 720 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 KREMEN1Q96MU8 473 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 EIF2AQ9BY44 585 aaKnown RBP13.48□□□□□ -0.25
SRSF1-204ENST00000581979 IMPG2Q9BZV3 1241 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 ASB7Q9H672 318 aa13.48□□□□□ -0.25
SRSF1-204ENST00000581979 ALG13Q9NP73 1137 aaKnown RBP13.48□□□□□ -0.25
SRSF1-204ENST00000581979 ZNF263O14978 683 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 LCA5LO95447 670 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 MAGEA1P43355 309 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 YARSP54577 528 aaKnown RBP13.47□□□□□ -0.25
SRSF1-204ENST00000581979 SLC18A3Q16572 532 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 SLC10A6Q3KNW5 377 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 JADE1Q6IE81 842 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 TXLNBQ8N3L3 684 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 LUC7LQ9NQ29 371 aaKnown RBP13.47□□□□□ -0.25
SRSF1-204ENST00000581979 SNTG2Q9NY99 539 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 PCDHA13Q9Y5I0 950 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 GRXCR2A6NFK2 248 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 TBKBP1A7MCY6 615 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 CST3P01034 146 aaPredicted RBP13.47□□□□□ -0.25
SRSF1-204ENST00000581979 NFICP08651 508 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 ZSCAN20P17040 1043 aaPredicted RBP13.47□□□□□ -0.25
SRSF1-204ENST00000581979 DNAJB1P25685 340 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 ANXA13P27216 316 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 LTBRP36941 435 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 VAV2P52735 878 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 NOP14P78316 857 aaKnown RBP13.47□□□□□ -0.25
SRSF1-204ENST00000581979 GCNT1Q02742 428 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 HYAL1Q12794 435 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 CCDC122Q5T0U0 273 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 SPOPLQ6IQ16 392 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 PTCRAQ6ISU1 281 aaPredicted RBP13.47□□□□□ -0.25
SRSF1-204ENST00000581979 SYT10Q6XYQ8 523 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 CD302Q8IX05 232 aa13.47□□□□□ -0.25
SRSF1-204ENST00000581979 AAASQ9NRG9 546 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms