RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 KLHL23Q8NBE8 558 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 SMRP1Q8NCR6 262 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 VN1R2Q8NFZ6 395 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 TMC2Q8TDI7 906 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 C18orf25Q96B23 403 aaPredicted RBP14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 IGSF21Q96ID5 467 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 ANKRD36BP1Q96IX9 119 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 CGRRF1Q99675 332 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 NAA15Q9BXJ9 866 aaKnown RBP14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 CXCL16Q9H2A7 254 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 PDE11AQ9HCR9 933 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 TUBGCP4Q9UGJ1 667 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 LZTS1Q9Y250 596 aa14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 R3HCC1Q9Y3T6 440 aaKnown RBP14.53□□□□□ -0.08
CSNK1D-220ENST00000581737 SF3B1O75533 1304 aaKnown RBP eCLIP14.52□□□□□ -0.089e-6■■■■■ 68.9
CSNK1D-220ENST00000581737 A0A1W2PQC6 194 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 LGALS16A8MUM7 142 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 PES1O00541 588 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 PODXLO00592 558 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 AKAP3O75969 853 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 DLATP10515 647 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 TNNI1P19237 187 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 LRPAP1P30533 357 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 PBX3P40426 434 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 NRIP1P48552 1158 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 CASP4P49662 377 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 ELAVL2Q12926 359 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 BMS1Q14692 1282 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 CBX2Q14781 532 aaPredicted RBP14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 TSR1Q2NL82 804 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 HSP90AA4PQ58FG1 418 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 DCLRE1AQ6PJP8 1040 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 CREBRFQ8IUR6 639 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 EFCAB13Q8IY85 973 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 CCDC127Q96BQ5 260 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 CNOT6LQ96LI5 555 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 NUP58Q9BVL2 599 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 METTL14Q9HCE5 456 aaKnown RBP14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 INTS13Q9NVM9 706 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 DPP3Q9NY33 737 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 ADAM28Q9UKQ2 775 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 ITGA11Q9UKX5 1188 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 USP15Q9Y4E8 981 aaPredicted RBP14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 PLXNA4Q9HCM2 1894 aa14.52□□□□□ -0.09
CSNK1D-220ENST00000581737 KIF2AO00139 706 aaPredicted RBP14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 TRAPPC3O43617 180 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 STX10O60499 249 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 TADA2AO75478 443 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 B3GAT3O94766 335 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 PDGFBP01127 241 aaPredicted RBP14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 SKILP12757 684 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 CLCNKBP51801 687 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 VAMP7P51809 220 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 SOX4Q06945 474 aaPredicted RBP14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 BFSP1Q12934 665 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 UPP1Q16831 310 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 CCDC40Q4G0X9 1142 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 FBXL6Q8N531 539 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 EFHBQ8N7U6 833 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 KIAA1524Q8TCG1 905 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 PARD3BQ8TEW8 1205 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 ASIC4Q96FT7 647 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 ZNF560Q96MR9 790 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 NAP1L5Q96NT1 182 aaPredicted RBP14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 DUSP9Q99956 384 aaKnown RBP14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 GOLGA2P5Q9HBQ8 144 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 MARCH5Q9NX47 278 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 ARMCX3Q9UH62 379 aaPredicted RBP14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 NUB1Q9Y5A7 615 aa14.51□□□□□ -0.09
CSNK1D-220ENST00000581737 ARHGEF37A1IGU5 675 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 NT5C1B-RDH14C9J2C7 533 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 AKR1B15C9JRZ8 316 aaPredicted RBP14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 PER2O15055 1255 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 GFRA3O60609 400 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 KIF4AO95239 1232 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 TUBB4AP04350 444 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 PNPLA4P41247 253 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 WNT7BP56706 349 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 CLDN10P78369 228 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 UBXN1Q04323 297 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 MAN2A1Q16706 1144 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 DNTTIP2Q5QJE6 756 aaKnown RBP14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 PDE12Q6L8Q7 609 aaKnown RBP14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 FRMD5Q7Z6J6 570 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 DDX53Q86TM3 631 aaKnown RBP14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 POF1BQ8WVV4 589 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 RPGRIP1Q96KN7 1286 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 MED15Q96RN5 788 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 TUBGCP2Q9BSJ2 902 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 MTMR12Q9C0I1 747 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 KCNF1Q9H3M0 494 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 TAB2Q9NYJ8 693 aa14.5□□□□□ -0.09
CSNK1D-220ENST00000581737 ZFHX2Q9C0A1 2572 aaPredicted RBP14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 GOLGA6L9A6NEM1 432 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 LRRIQ3A6PVS8 624 aaPredicted RBP14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 ARHGAP6O43182 974 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 GTF2H1P32780 548 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 RBP5P82980 135 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 C9orf57Q5W0N0 161 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 FUT10Q6P4F1 479 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms