RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ARIH2O95376 493 aa15.21■□□□□ 0.03
CSNK1D-217ENST00000581241 SLC29A2Q14542 456 aa15.21■□□□□ 0.03
CSNK1D-217ENST00000581241 SLC44A4Q53GD3 710 aa15.21■□□□□ 0.03
CSNK1D-217ENST00000581241 CEP78Q5JTW2 689 aa15.21■□□□□ 0.03
CSNK1D-217ENST00000581241 DDX42Q86XP3 938 aaKnown RBP eCLIP15.21■□□□□ 0.03
CSNK1D-217ENST00000581241 TNIP3Q96KP6 325 aa15.21■□□□□ 0.03
CSNK1D-217ENST00000581241 PRR36Q9H6K5 1346 aa15.21■□□□□ 0.03
CSNK1D-217ENST00000581241 MYMKA6NI61 221 aa15.21■□□□□ 0.03
CSNK1D-217ENST00000581241 DGKIO75912 1065 aa15.21■□□□□ 0.03
CSNK1D-217ENST00000581241 ARHGEF6Q15052 776 aa15.21■□□□□ 0.03
CSNK1D-217ENST00000581241 RBBP8NLQ8NC74 664 aaPredicted RBP15.21■□□□□ 0.03
CSNK1D-217ENST00000581241 DDHD1Q8NEL9 900 aa15.21■□□□□ 0.03
CSNK1D-217ENST00000581241 USP1O94782 785 aa15.21■□□□□ 0.02
CSNK1D-217ENST00000581241 PRKCBP05771 671 aa15.21■□□□□ 0.02
CSNK1D-217ENST00000581241 ZNF677Q86XU0 584 aa15.21■□□□□ 0.02
CSNK1D-217ENST00000581241 ATPAF2Q8N5M1 289 aa15.21■□□□□ 0.02
CSNK1D-217ENST00000581241 PPP1R3GB7ZBB8 358 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 E7ENQ6 273 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 EEF2KO00418 725 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 POLBP06746 335 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 NFX1Q12986 1120 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 PPP4R4Q6NUP7 873 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 WDR93Q6P2C0 686 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 MFN1Q8IWA4 741 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 CD209Q9NNX6 404 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 RHBDL2Q9NX52 303 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 TMEM161AQ9NX61 479 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 NDUFA13Q9P0J0 144 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 SFMBT1Q9UHJ3 866 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 CCDC78A2IDD5 438 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 SNRPFP62306 86 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 EFHBQ8N7U6 833 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 IGDCC4Q8TDY8 1250 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 AGAP3Q96P47 875 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 KIZQ2M2Z5 673 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 PKN3Q6P5Z2 889 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 KDELC2Q7Z4H8 507 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 TRIM69Q86WT6 500 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 NEDD1Q8NHV4 660 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 ABHD8Q96I13 439 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 CNDP1Q96KN2 507 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 PCDHA10Q9Y5I2 948 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 NPHP4O75161 1426 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 O00370 1275 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 ZNF263O14978 683 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 SPATA33Q96N06 139 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 DDX50Q9BQ39 737 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 FAM205CA6NFA0 338 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 CPA2P48052 419 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 FNTAP49354 379 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 KLHDC7AQ5VTJ3 777 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 PLEKHM3Q6ZWE6 761 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 LUZP2Q86TE4 346 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 TPCN2Q8NHX9 752 aa15.2■□□□□ 0.02
CSNK1D-217ENST00000581241 ZCWPW2Q504Y3 356 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 RAB42Q8N4Z0 105 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 MYCBPAPQ8TBZ2 947 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 MED15Q96RN5 788 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 VPS33BQ9H267 617 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 RSAD1Q9HA92 442 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 AP4S1Q9Y587 144 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 ECE2O60344 883 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 GNL1P36915 607 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 NNMTP40261 264 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 CLK1P49759 484 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 SNRNP35Q16560 246 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 EFL1Q7Z2Z2 1120 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 FUT8Q9BYC5 575 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 HECW2Q9P2P5 1572 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 F5H6K3 240 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 TBX3O15119 743 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 CAND2O75155 1236 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 ALBP02768 609 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 GSNP06396 782 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 PDGFRAP16234 1089 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 KLRC3Q07444 240 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 SGSM1Q2NKQ1 1148 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 TRIM16LQ309B1 348 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 DCUN1D1Q96GG9 259 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 MMP19Q99542 508 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 CAAP1Q9H8G2 361 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 CD274Q9NZQ7 290 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 RPS6P62753 249 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 NKX1-1Q15270 411 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 COBLL1Q53SF7 1204 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 CENPPQ6IPU0 288 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 CALML6Q8TD86 181 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 ANKS1AQ92625 1134 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 PHF21AQ96BD5 680 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 CARD9Q9H257 536 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 RGL1Q9NZL6 768 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 COL15A1P39059 1388 aa15.19■□□□□ 0.02
CSNK1D-217ENST00000581241 PDE5AO76074 875 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 CSPG5O95196 566 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 L2HGDHQ9H9P8 463 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 P4HA2O15460 535 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 KBTBD12Q3ZCT8 623 aa15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 SNRNP27Q8WVK2 155 aaKnown RBP15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 KLF6Q99612 283 aaPredicted RBP15.18■□□□□ 0.02
CSNK1D-217ENST00000581241 FAM118BQ9BPY3 351 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms