RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.67■□□□□ 0.26
SS18-216ENST00000580751 A0A1W2PQC6 194 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 SPTLC1O15269 473 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 AP5Z1O43299 807 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 N4BP1O75113 896 aaKnown RBP16.67■□□□□ 0.26
SS18-216ENST00000580751 STAU1O95793 577 aaKnown RBP16.67■□□□□ 0.26
SS18-216ENST00000580751 ODC1P11926 461 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 ATICP31939 592 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 CA8P35219 290 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 IRS1P35568 1242 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 NCOA4Q13772 614 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 VWA3BQ502W6 1294 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 RTP2Q5QGT7 225 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 TAS1R1Q7RTX1 841 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 CEP57Q86XR8 500 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 MRPL43Q8N983 215 aaKnown RBP16.67■□□□□ 0.26
SS18-216ENST00000580751 RIN2Q8WYP3 895 aaPredicted RBP16.67■□□□□ 0.26
SS18-216ENST00000580751 PIK3R5Q8WYR1 880 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 IQCDQ96DY2 449 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 SENP8Q96LD8 212 aa16.67■□□□□ 0.26
SS18-216ENST00000580751 XPO4Q9C0E2 1151 aaKnown RBP16.67■□□□□ 0.26
SS18-216ENST00000580751 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.67■□□□□ 0.26
SS18-216ENST00000580751 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.67■□□□□ 0.26
SS18-216ENST00000580751 PMM2O15305 246 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 CXCL14O95715 111 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 TYMPP19971 482 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 TKTP29401 623 aaKnown RBP16.66■□□□□ 0.26
SS18-216ENST00000580751 PIK3CAP42336 1068 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 ZNF699Q32M78 642 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 FKBP15Q5T1M5 1219 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 KIAA0319Q5VV43 1072 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 ANKS3Q6ZW76 656 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 CREBRFQ8IUR6 639 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 CCDC150Q8NCX0 1101 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 TAF4BQ92750 862 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 B3GALT6Q96L58 329 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 EMILIN2Q9BXX0 1053 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 IMPG2Q9BZV3 1241 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 NDST4Q9H3R1 872 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 GDAP2Q9NXN4 497 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 IMPACTQ9P2X3 320 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 DSEQ9UL01 958 aa16.66■□□□□ 0.26
SS18-216ENST00000580751 VWA8A3KMH1 1905 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 ATG2AQ2TAZ0 1938 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 C2orf71A6NGG8 1288 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 GOLGA6L6A8MZA4 724 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 C2CD2LO14523 706 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 P4HA2O15460 535 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 HUS1O60921 280 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 CLSTN1O94985 981 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 VNN1O95497 513 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 CST3P01034 146 aaPredicted RBP16.65■□□□□ 0.26
SS18-216ENST00000580751 HLA-DRAP01903 254 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 MYL6P60660 151 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 MYL7Q01449 175 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 CETN1Q12798 172 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 PSMD5Q16401 504 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 SGSM1Q2NKQ1 1148 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 VARS2Q5ST30 1063 aaKnown RBP16.65■□□□□ 0.26
SS18-216ENST00000580751 FBXL13Q8NEE6 735 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 AUTS2Q8WXX7 1259 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 NAP1L5Q96NT1 182 aaPredicted RBP16.65■□□□□ 0.26
SS18-216ENST00000580751 XYLT2Q9H1B5 865 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 VRTNQ9H8Y1 702 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 PCDHGC5Q9Y5F6 944 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 SNX9Q9Y5X1 595 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 ITIH6Q6UXX5 1313 aa16.65■□□□□ 0.26
SS18-216ENST00000580751 GTPBP10A4D1E9 387 aaKnown RBP16.64■□□□□ 0.25
SS18-216ENST00000580751 HIDE1A8MVS5 230 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 H7C4K7 107 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 CYB561D2O14569 222 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 LILRB3O75022 631 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 AFPP02771 609 aaKnown RBP16.64■□□□□ 0.25
SS18-216ENST00000580751 CYP11A1P05108 521 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 FMO5P49326 533 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 TNNC1P63316 161 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 YWHAHQ04917 246 aaPredicted RBP16.64■□□□□ 0.25
SS18-216ENST00000580751 CBWD6Q4V339 395 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 HSP90AA4PQ58FG1 418 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 CBWD3Q5JTY5 395 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 MIIPQ5JXC2 388 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 CBWD5Q5RIA9 395 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 ZNF280DQ6N043 979 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 METTL23Q86XA0 190 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 TMEM86AQ8N2M4 240 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 MICALL1Q8N3F8 863 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 TOP6BLQ8N6T0 577 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 LNX1Q8TBB1 728 aaPredicted RBP16.64■□□□□ 0.25
SS18-216ENST00000580751 SPATA18Q8TC71 538 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 TAS1R2Q8TE23 839 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 ERGIC2Q96RQ1 377 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 CDCA3Q99618 268 aaPredicted RBP16.64■□□□□ 0.25
SS18-216ENST00000580751 OXCT2Q9BYC2 517 aaPredicted RBP16.64■□□□□ 0.25
SS18-216ENST00000580751 VPS16Q9H269 839 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 TLE6Q9H808 572 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 RXFP1Q9HBX9 757 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 TAB2Q9NYJ8 693 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 FNIP2Q9P278 1114 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 BACE2Q9Y5Z0 518 aa16.64■□□□□ 0.25
SS18-216ENST00000580751 OAZ2O95190 189 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms