RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 PSMD2Q13200 908 aa26.87■■□□□ 1.89
CDC42EP4-205ENST00000580315 NELFCDQ8IXH7 590 aa26.87■■□□□ 1.89
CDC42EP4-205ENST00000580315 TMEM130Q8N3G9 435 aa26.87■■□□□ 1.89
CDC42EP4-205ENST00000580315 CCDC47Q96A33 483 aaKnown RBP26.87■■□□□ 1.89
CDC42EP4-205ENST00000580315 KIAA1586Q9HCI6 787 aa26.87■■□□□ 1.89
CDC42EP4-205ENST00000580315 ARHGEF37A1IGU5 675 aa26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 AARSP49588 968 aaKnown RBP eCLIP26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 FOXK2Q01167 660 aa26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 MRPL58Q14197 206 aaKnown RBP26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 BMT2Q1RMZ1 405 aa26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 CTXN3Q4LDR2 81 aa26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 SLC8B1Q6J4K2 584 aa26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 GET4Q7L5D6 327 aaPredicted RBP26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 USP37Q86T82 979 aa26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 ZSWIM2Q8NEG5 633 aa26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 GPR152Q8TDT2 470 aa26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 CACTINQ8WUQ7 758 aaKnown RBP26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 GOLPH3LQ9H4A5 285 aa26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 TBC1D17Q9HA65 648 aa26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 HSPBP1Q9NZL4 362 aa26.86■■□□□ 1.89
CDC42EP4-205ENST00000580315 DOCK8Q8NF50 2099 aa26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 ANO9A1A5B4 782 aa26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 ANHXE9PGG2 379 aa26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 PIRO00625 290 aa26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 KLRC4O43908 158 aa26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 HNRNPA1P09651 372 aaKnown RBP eCLIP26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 RFX1P22670 979 aa26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 LILRA4P59901 499 aa26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 TFAMQ00059 246 aaKnown RBP26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 KMT5BQ4FZB7 885 aa26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 PPM1LQ5SGD2 360 aa26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 RSPO2Q6UXX9 243 aaPredicted RBP26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 KRBA2Q6ZNG9 492 aa26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 EFCAB13Q8IY85 973 aa26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 OXCT2Q9BYC2 517 aaPredicted RBP26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 AGPAT3Q9NRZ7 376 aa26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 CGNQ9P2M7 1197 aaKnown RBP26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 ZNF292O60281 2723 aa26.85■■□□□ 1.89
CDC42EP4-205ENST00000580315 ZNF233A6NK53 670 aa26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 PPEF2O14830 753 aa26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 ZNF202O95125 648 aa26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 C8AP07357 584 aa26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 ARPP19P56211 112 aa26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 ROR1Q01973 937 aa26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 YWHAHQ04917 246 aaPredicted RBP26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 HTR4Q13639 388 aa26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 SURF1Q15526 300 aa26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 UVSSAQ2YD98 709 aa26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 RTL10Q7L3V2 364 aa26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 FBXL5Q9UKA1 691 aa26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 PDCD11Q14690 1871 aaKnown RBP26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 DCHS1Q96JQ0 3298 aa26.84■■□□□ 1.89
CDC42EP4-205ENST00000580315 TGFB1I1O43294 461 aa26.83■■□□□ 1.89
CDC42EP4-205ENST00000580315 TBC1D4O60343 1298 aa26.83■■□□□ 1.89
CDC42EP4-205ENST00000580315 RPN1P04843 607 aaKnown RBP26.83■■□□□ 1.89
CDC42EP4-205ENST00000580315 ODC1P11926 461 aa26.83■■□□□ 1.89
CDC42EP4-205ENST00000580315 TYMPP19971 482 aa26.83■■□□□ 1.89
CDC42EP4-205ENST00000580315 TAF6P49848 677 aa26.83■■□□□ 1.89
CDC42EP4-205ENST00000580315 KNOP1Q1ED39 458 aaKnown RBP26.83■■□□□ 1.89
CDC42EP4-205ENST00000580315 ST13P5Q8NFI4 369 aaPredicted RBP26.83■■□□□ 1.89
CDC42EP4-205ENST00000580315 ZNF461Q8TAF7 563 aa26.83■■□□□ 1.89
CDC42EP4-205ENST00000580315 GOLGA5Q8TBA6 731 aa26.83■■□□□ 1.89
CDC42EP4-205ENST00000580315 CIZ1Q9ULV3 898 aaPredicted RBP26.83■■□□□ 1.89
CDC42EP4-205ENST00000580315 NUMBLQ9Y6R0 609 aa26.83■■□□□ 1.89
CDC42EP4-205ENST00000580315 EP300Q09472 2414 aaPredicted RBP26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 MTCL1Q9Y4B5 1905 aaKnown RBP26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 XYLBO75191 536 aa26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 OAZ2O95190 189 aa26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 FSHRP23945 695 aa26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 HOXA9P31269 272 aa26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 ELF1P32519 619 aa26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 STK4Q13043 487 aa26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 PHLDB3Q6NSJ2 640 aa26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 SLC7A14Q8TBB6 771 aa26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 SENP8Q96LD8 212 aa26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 ZNF560Q96MR9 790 aa26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 PDE11AQ9HCR9 933 aa26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 ARHGEF3Q9NR81 526 aa26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 SLC2A4RGQ9NR83 387 aa26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 TIMM13Q9Y5L4 95 aaPredicted RBP26.82■■□□□ 1.88
CDC42EP4-205ENST00000580315 VWA8A3KMH1 1905 aa26.81■■□□□ 1.88
CDC42EP4-205ENST00000580315 CLIC2O15247 247 aa26.81■■□□□ 1.88
CDC42EP4-205ENST00000580315 KIF20AO95235 890 aa26.81■■□□□ 1.88
CDC42EP4-205ENST00000580315 TMEM191BP0C7N4 346 aa26.81■■□□□ 1.88
CDC42EP4-205ENST00000580315 PNPLA4P41247 253 aa26.81■■□□□ 1.88
CDC42EP4-205ENST00000580315 SV2CQ496J9 727 aa26.81■■□□□ 1.88
CDC42EP4-205ENST00000580315 TPGS2Q68CL5 300 aa26.81■■□□□ 1.88
CDC42EP4-205ENST00000580315 GRASPQ7Z6J2 395 aaPredicted RBP26.81■■□□□ 1.88
CDC42EP4-205ENST00000580315 CBWD2Q8IUF1 395 aa26.81■■□□□ 1.88
CDC42EP4-205ENST00000580315 XXYLT1Q8NBI6 393 aa26.81■■□□□ 1.88
CDC42EP4-205ENST00000580315 DSEQ9UL01 958 aa26.81■■□□□ 1.88
CDC42EP4-205ENST00000580315 SIT1Q9Y3P8 196 aa26.81■■□□□ 1.88
CDC42EP4-205ENST00000580315 ZFP37Q9Y6Q3 630 aaPredicted RBP26.81■■□□□ 1.88
CDC42EP4-205ENST00000580315 WDR27A2RRH5 827 aa26.8■■□□□ 1.88
CDC42EP4-205ENST00000580315 SPTLC1O15269 473 aa26.8■■□□□ 1.88
CDC42EP4-205ENST00000580315 ABLIM3O94929 683 aa26.8■■□□□ 1.88
CDC42EP4-205ENST00000580315 DCNP07585 359 aaKnown RBP26.8■■□□□ 1.88
CDC42EP4-205ENST00000580315 CPB1P15086 417 aa26.8■■□□□ 1.88
CDC42EP4-205ENST00000580315 CYP2J2P51589 502 aa26.8■■□□□ 1.88
CDC42EP4-205ENST00000580315 WNT7BP56706 349 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms