RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 VPS41P49754 854 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 GPC3P51654 580 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 CCNHP51946 323 aaPredicted RBP7.02□□□□□ -1.29
COPS3-216ENST00000579716 NEK4P51957 841 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 CTSWP56202 376 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 HDAC4P56524 1084 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 ARPC4P59998 168 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 CAP1Q01518 475 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 GABPB1Q06547 395 aaPredicted RBP7.02□□□□□ -1.29
COPS3-216ENST00000579716 SNAPC2Q13487 334 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 DPYSQ14117 519 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 FRG1Q14331 258 aaKnown RBP7.02□□□□□ -1.29
COPS3-216ENST00000579716 KRT32Q14532 448 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 CWF19L2Q2TBE0 894 aaKnown RBP7.02□□□□□ -1.29
COPS3-216ENST00000579716 ANO4Q32M45 955 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 EMC10Q5UCC4 262 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 FBXW10Q5XX13 1052 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 IYDQ6PHW0 289 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 MTHFD1LQ6UB35 978 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 TTLL7Q6ZT98 887 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 RAB11FIP2Q7L804 512 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 HOOK3Q86VS8 718 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 KRT73Q86Y46 540 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 P3H2Q8IVL5 708 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 TTLL11Q8NHH1 800 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 PPP1R13LQ8WUF5 828 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 CCDC74BQ96LY2 380 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 SPZ1Q9BXG8 430 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 RNF38Q9H0F5 515 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 OR10A4Q9H209 315 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 PDE11AQ9HCR9 933 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 TM9SF3Q9HD45 589 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 PDE7BQ9NP56 450 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 CCDC177Q9NQR7 707 aaPredicted RBP7.02□□□□□ -1.29
COPS3-216ENST00000579716 HOMER3Q9NSC5 361 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 GGA3Q9NZ52 723 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 CDC23Q9UJX2 597 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 CLEC4AQ9UMR7 237 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 CHTOPQ9Y3Y2 248 aaKnown RBP7.02□□□□□ -1.29
COPS3-216ENST00000579716 DTNAQ9Y4J8 743 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 DHX29Q7Z478 1369 aaKnown RBP7.02□□□□□ -1.29
COPS3-216ENST00000579716 AATKQ6ZMQ8 1374 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 A0A087WV62 115 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 TCAF2A6NFQ2 919 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 TRAF5O00463 557 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 MTSS1O43312 755 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 GREM1O60565 184 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 S100A9P06702 114 aaKnown RBP7.01□□□□□ -1.29
COPS3-216ENST00000579716 POLBP06746 335 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 CLTBP09497 229 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 COL6A2P12110 1019 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 RLBP1P12271 317 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 POU3F2P20265 443 aaPredicted RBP7.01□□□□□ -1.29
COPS3-216ENST00000579716 KELP23276 732 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 KIR3DL1P43629 444 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 MNAT1P51948 309 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 KRTAP10-2P60368 255 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 ETF1P62495 437 aaKnown RBP7.01□□□□□ -1.29
COPS3-216ENST00000579716 BEX3Q00994 111 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 DR1Q01658 176 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 BFSP1Q12934 665 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 CUL2Q13617 745 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 AUHQ13825 339 aaKnown RBP7.01□□□□□ -1.29
COPS3-216ENST00000579716 PCBP1Q15365 356 aaKnown RBP eCLIP7.01□□□□□ -1.29
COPS3-216ENST00000579716 TDRD12Q587J7 1177 aaKnown RBP7.01□□□□□ -1.29
COPS3-216ENST00000579716 IFIT1BQ5T764 474 aaKnown RBP7.01□□□□□ -1.29
COPS3-216ENST00000579716 CIAPIN1Q6FI81 312 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 PKN3Q6P5Z2 889 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 IL27RAQ6UWB1 636 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 LBX2Q6XYB7 198 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 B3GNT6Q6ZMB0 384 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 TMPRSS7Q7RTY8 843 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 HEATR4Q86WZ0 1026 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 SLITRK4Q8IW52 837 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 RPAP2Q8IXW5 612 aaPredicted RBP7.01□□□□□ -1.29
COPS3-216ENST00000579716 RBBP8NLQ8NC74 664 aaPredicted RBP7.01□□□□□ -1.29
COPS3-216ENST00000579716 OR8K3Q8NH51 312 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 CCDC110Q8TBZ0 833 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 RNF139Q8WU17 664 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 RAPGEF5Q92565 580 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 EXOC4Q96A65 974 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 ARL8AQ96BM9 186 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 ART5Q96L15 291 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 FERD3LQ96RJ6 166 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 DPH2Q9BQC3 489 aaPredicted RBP7.01□□□□□ -1.29
COPS3-216ENST00000579716 RIOK1Q9BRS2 568 aaKnown RBP7.01□□□□□ -1.29
COPS3-216ENST00000579716 TBCDQ9BTW9 1192 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 HGH1Q9BTY7 390 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 C1orf21Q9H246 121 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 SMARCAD1Q9H4L7 1026 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 UPF2Q9HAU5 1272 aaKnown RBP7.01□□□□□ -1.29
COPS3-216ENST00000579716 FANCEQ9HB96 536 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 GCM1Q9NP62 436 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 TBC1D29Q9UFV1 150 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 LIMCH1Q9UPQ0 1083 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 APOBEC2Q9Y235 224 aaKnown RBP7.01□□□□□ -1.29
COPS3-216ENST00000579716 WDR37Q9Y2I8 494 aa7.01□□□□□ -1.29
COPS3-216ENST00000579716 NSD2O96028 1365 aa7□□□□□ -1.29
COPS3-216ENST00000579716 A0A0G2JLL6 359 aaPredicted RBP7□□□□□ -1.29
COPS3-216ENST00000579716 F6X3S4 739 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms