RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 IFNAR1P17181 557 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 MARCKSP29966 332 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 MCM4P33991 863 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ALDH1A3P47895 512 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 MCM2P49736 904 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 RARRES1P49788 294 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 FAM193AP78312 1265 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 LMAN2Q12907 356 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 RUNX3Q13761 415 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 DCAF4L1Q3SXM0 396 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 CDCA2Q69YH5 1023 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 CENPQQ7L2Z9 268 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ARMCX6Q7L4S7 300 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 KRT25Q7Z3Z0 450 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 DNAJB7Q7Z6W7 309 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TTC30AQ86WT1 665 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 NUSAP1Q9BXS6 441 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 C2orf40Q9H1Z8 148 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 CRISPLD1Q9H336 500 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 OBP2AQ9NY56 170 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 SPAG17Q6Q759 2223 aa14.45□□□□□ -0.1
CDK5RAP3-213ENST00000579605 PDCD11Q14690 1871 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 H0Y626 953 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 SOAT2O75908 522 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TRIM16O95361 564 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 BAG4O95429 457 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 VNN2O95498 520 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ATP2B1P20020 1258 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 CDR1P51861 262 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 YARSP54577 528 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 SSRP1Q08945 709 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 PLD1Q13393 1074 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 SYT13Q7L8C5 426 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 NEK8Q86SG6 692 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 APPL2Q8NEU8 664 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TSTD1Q8NFU3 115 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 DEPTORQ8TB45 409 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 BSNDQ8WZ55 320 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 DDX12PQ92771 950 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 C18orf25Q96B23 403 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TBC1D32Q96NH3 1257 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 AIFM3Q96NN9 605 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 POLR3CQ9BUI4 534 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 CCDC86Q9H6F5 360 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 HPS4Q9NQG7 708 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 FSCN3Q9NQT6 498 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 EBF1Q9UH73 591 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 MAFFQ9ULX9 164 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 KCNJ14Q9UNX9 436 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 RAXQ9Y2V3 346 aa14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TIMM13Q9Y5L4 95 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-213ENST00000579605 FAM221BA6H8Z2 402 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 CYSRT1A8MQ03 144 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 PRB1P04280 392 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ARSAP15289 507 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ENGP17813 658 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 DRD1P21728 446 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 NPY5RQ15761 445 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 PIP4P1Q86T03 277 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 C11orf74Q86VG3 221 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TRIM22Q8IYM9 498 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 HDDC3Q8N4P3 179 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 CEP120Q8N960 986 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 GLIS3Q8NEA6 775 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 MDM1Q8TC05 714 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 SUSD3Q96L08 255 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ZMAT2Q96NC0 199 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 P2RY13Q9BPV8 354 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 HSD17B14Q9BPX1 270 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 KIFC3Q9BVG8 833 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 GTPBP2Q9BX10 602 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TASP1Q9H6P5 420 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 POLD4Q9HCU8 107 aa14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 MBD1Q9UIS9 605 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ASH1LQ9NR48 2969 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP3-213ENST00000579605 FREM2Q5SZK8 3169 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 MAP3K13O43283 966 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 LYPLA2O95372 231 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 GCFC2P16383 781 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ATXN3P54252 364 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 AMPD2Q01433 879 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 SEMA3BQ13214 749 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 NT5DC1Q5TFE4 455 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ATF7IP2Q5U623 682 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 ANO7Q6IWH7 933 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 PNPLA1Q8N8W4 532 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 DAGLBQ8NCG7 672 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TTC16Q8NEE8 873 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 JAKMIP1Q96N16 626 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 FAM83CQ9BQN1 747 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 CCDC94Q9BW85 323 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 SLC46A2Q9BY10 475 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 CCDC113Q9H0I3 377 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 TMEM74BQ9NUR3 256 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 SLC38A7Q9NVC3 462 aa14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 EVLQ9UI08 416 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-213ENST00000579605 IGSF10Q6WRI0 2623 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 CFIP05156 583 aa14.41□□□□□ -0.1
CDK5RAP3-213ENST00000579605 YWHAHQ04917 246 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms